RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ANKRD6Q9Y2G4 727 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 PAXBP1Q9Y5B6 917 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 A0A088AWK7 358 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 RGS10O43665 173 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 MARCH6O60337 910 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 SRGAP2O75044 1071 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 RASAL1O95294 804 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 CD63P08962 238 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 FGF2P09038 288 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 CT47B1P0C2W7 299 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 AZU1P20160 251 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 HTR1BP28222 390 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 TACR3P29371 465 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 UQCRC1P31930 480 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 ANP32AP39687 249 aaKnown RBP2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 CPA2P48052 419 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 ARFIP2P53365 341 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 ANAPC15P60006 121 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 CFHR3Q02985 330 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 EGR4Q05215 589 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 LTBQ06643 244 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 STIM1Q13586 685 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 PRTGQ2VWP7 1150 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 KRTAP13-3Q3SY46 172 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 IFIT1BQ5T764 474 aaKnown RBP2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 CACHD1Q5VU97 1274 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 DAAM2Q86T65 1068 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 DENND1CQ8IV53 801 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 FTSJ3Q8IY81 847 aaKnown RBP2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 ZNF622Q969S3 477 aaKnown RBP eCLIP2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 TRIM44Q96DX7 344 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 PPP1R9BQ96SB3 815 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 TRIM5Q9C035 493 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 ZNF518BQ9C0D4 1074 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 PCDHA7Q9UN72 937 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 CDY1Q9Y6F8 540 aa2.48□□□□□ -2.01
HMGB3P17-201ENST00000504195 KIF26BQ2KJY2 2108 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 A0A0U1RQG5 324 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 PLEKHD1A6NEE1 506 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 ANTXRLA6NF34 631 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 CLIC1O00299 241 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 CTIFO43310 598 aaKnown RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 SPRY2O43597 315 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 AP1G1O43747 822 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 LDB3O75112 727 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 SERPINB2P05120 415 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 PF4V1P10720 104 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 CD19P15391 556 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 NPR1P16066 1061 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 TCEA1P23193 301 aaKnown RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 TIRAPP58753 221 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 TIAL1Q01085 375 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 MFSD13AQ14CX5 517 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 PFKFB3Q16875 520 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 FAM110CQ1W6H9 321 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 MRGPRG-AS1Q2M3A8 158 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 DCAF12L1Q5VU92 463 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 ZNF793Q6ZN11 406 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 COL23A1Q86Y22 540 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 FAM177A1Q8N128 213 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 CNPY4Q8N129 248 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 GPATCH11Q8N954 259 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 DIS3LQ8TF46 1054 aaKnown RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 JPH3Q8WXH2 748 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 MIB2Q96AX9 1013 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 CTHRC1Q96CG8 243 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 HIC2Q96JB3 615 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 DPH1Q9BZG8 443 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 MYLK2Q9H1R3 596 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 A1CFQ9NQ94 594 aaKnown RBP2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 XPNPEP3Q9NQH7 507 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 AASDHPPTQ9NRN7 309 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 IP6K2Q9UHH9 426 aa2.47□□□□□ -2.01
HMGB3P17-201ENST00000504195 LOC102723971A0A1B0GUV8 181 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 TMEM233B4DJY2 109 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 H3BML4 177 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 EXOC5O00471 708 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 PPM1GO15355 546 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 INPPL1O15357 1258 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 CD3EAPO15446 510 aaKnown RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 CCP110O43303 1012 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZC3H11AO75152 810 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 USP12O75317 370 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 KITP10721 976 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 ATF7P17544 494 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 DEKP35659 375 aaKnown RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 MLH1P40692 756 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 YPEL5P62699 121 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC14A1Q13336 389 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZNF267Q14586 743 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 NADSYN1Q6IA69 706 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 RBM23Q86U06 439 aaKnown RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 EXOC8Q8IYI6 725 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 C12orf76Q8N812 135 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 BCAS4Q8TDM0 211 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 NEUROG1Q92886 237 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 SPSB4Q96A44 273 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 WDYHV1Q96HA8 205 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms