RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 YWHAQP27348 245 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 GNL1P36915 607 aaPredicted RBP16.73■□□□□ 0.27
DDR1-250ENST00000503628 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 SDE2Q6IQ49 451 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 CHPFQ8IZ52 775 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 SYCP3Q8IZU3 236 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 GLIS3Q8NEA6 775 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 SETD7Q8WTS6 366 aaKnown RBP16.73■□□□□ 0.27
DDR1-250ENST00000503628 FOXJ1Q92949 421 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
DDR1-250ENST00000503628 SNX25Q9H3E2 840 aa16.73■□□□□ 0.27
DDR1-250ENST00000503628 KIAA1522Q9P206 1035 aaPredicted RBP16.73■□□□□ 0.27
DDR1-250ENST00000503628 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
DDR1-250ENST00000503628 GOLGA4Q13439 2230 aaKnown RBP16.72■□□□□ 0.27
DDR1-250ENST00000503628 CLDN5O00501 218 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
DDR1-250ENST00000503628 TNNC2P02585 160 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 PTPN1P18031 435 aaKnown RBP16.72■□□□□ 0.27
DDR1-250ENST00000503628 WDR45BQ5MNZ6 344 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 HECTD3Q5T447 861 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 GRAMD4Q6IC98 578 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
DDR1-250ENST00000503628 ELOA2Q8IYF1 753 aaPredicted RBP16.72■□□□□ 0.27
DDR1-250ENST00000503628 NUP93Q8N1F7 819 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 FBXO32Q969P5 355 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 CCDC47Q96A33 483 aaKnown RBP16.72■□□□□ 0.27
DDR1-250ENST00000503628 MRGPRX1Q96LB2 322 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 ZDHHC5Q9C0B5 715 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 ZNF518BQ9C0D4 1074 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 CCSER2Q9H7U1 834 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 IL21RQ9HBE5 538 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 RAD54BQ9Y620 910 aa16.72■□□□□ 0.27
DDR1-250ENST00000503628 UBE4BO95155 1302 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 ASH1LQ9NR48 2969 aaKnown RBP16.71■□□□□ 0.27
DDR1-250ENST00000503628 SHROOM3Q8TF72 1996 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 PNOCQ13519 176 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 DUOXA2Q1HG44 320 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 TMPRSS7Q7RTY8 843 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 MARCH9Q86YJ5 346 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 GPD1LQ8N335 351 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 PDZD8Q8NEN9 1154 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 OR6B3Q8NGW1 331 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 ZNF507Q8TCN5 953 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 GABRG3Q99928 467 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 B3GNT5Q9BYG0 378 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 DPEP3Q9H4B8 488 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 DNAJC17Q9NVM6 304 aaKnown RBP16.71■□□□□ 0.27
DDR1-250ENST00000503628 DKK4Q9UBT3 224 aa16.71■□□□□ 0.27
DDR1-250ENST00000503628 A0A1B0GTW7 788 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 WASH3PC4AMC7 463 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 PRRT4C9JH25 899 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 RHOBTB3O94955 611 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 RTN3O95197 1032 aaPredicted RBP16.7■□□□□ 0.26
DDR1-250ENST00000503628 IRF1P10914 325 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 CYP4F3Q08477 520 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 STK4Q13043 487 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 KIAA1324Q6UXG2 1013 aaKnown RBP16.7■□□□□ 0.26
DDR1-250ENST00000503628 SCAMP5Q8TAC9 235 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 ADAM32Q8TC27 787 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 SCFD1Q8WVM8 642 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 DNASE2BQ8WZ79 361 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 OVCA2Q8WZ82 227 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 CRELD1Q96HD1 420 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 KCNK16Q96T55 309 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 DUSP9Q99956 384 aaKnown RBP16.7■□□□□ 0.26
DDR1-250ENST00000503628 LMBRD1Q9NUN5 540 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 TOR4AQ9NXH8 423 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 CACNA2D2Q9NY47 1150 aa16.7■□□□□ 0.26
DDR1-250ENST00000503628 TRABD2BA6NFA1 517 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 MEI4A8MW99 385 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 NEDD8-MDP1E9PL57 170 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 TACC1O75410 805 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 SMC2O95347 1197 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 CST3P01034 146 aaPredicted RBP16.69■□□□□ 0.26
DDR1-250ENST00000503628 ATXN1LP0C7T5 689 aaKnown RBP16.69■□□□□ 0.26
DDR1-250ENST00000503628 CD6P30203 668 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 HOXD13P35453 343 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 BMT2Q1RMZ1 405 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 SNX30Q5VWJ9 437 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 ZCCHC9Q8N567 271 aaKnown RBP16.69■□□□□ 0.26
DDR1-250ENST00000503628 KIAA0895Q8NCT3 520 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 BBS2Q9BXC9 721 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 MIR1-1HGQ9H1L0 117 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 GAREM1Q9H706 876 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 PRDM16Q9HAZ2 1276 aa16.69■□□□□ 0.26
DDR1-250ENST00000503628 GOLGA8CPA6NN73 597 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 CACNG3O60359 315 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 CILPO75339 1184 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 TYRP14679 529 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 BNC1Q01954 994 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 SURF1Q15526 300 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 TPGS1Q6ZTW0 290 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 TRAPPC11Q7Z392 1133 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 CBWD2Q8IUF1 395 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
DDR1-250ENST00000503628 SPATA20Q8TB22 786 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms