RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PDE6CP51160 858 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCNIQ14094 377 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 RAB30Q15771 203 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 PDCD2Q16342 344 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 LY6KQ17RY6 165 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 PROSER3Q2NL68 480 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 TUBB8Q3ZCM7 444 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCDC38Q502W7 563 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 CERCAMQ5T4B2 595 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 MANEALQ5VSG8 457 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 RAP1GAP2Q684P5 730 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 SLC18B1Q6NT16 456 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 USP17L6PQ6QN14 398 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 KIAA0408Q6ZU52 694 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 MEPCEQ7L2J0 689 aaKnown RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCDC28AQ8IWP9 274 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 MYCBPAPQ8TBZ2 947 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 IPO4Q8TEX9 1081 aaKnown RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 OSCP1Q8WVF1 389 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 ATRIPQ8WXE1 791 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 ATG4AQ8WYN0 398 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZBTB45Q96K62 511 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 PBKQ96KB5 322 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 ALG8Q9BVK2 526 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 TRIM5Q9C035 493 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 PRSS22Q9GZN4 317 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 PCDHAC1Q9H158 963 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZBTB26Q9HCK0 441 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 OBP2BQ9NPH6 170 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 TM7SF3Q9NS93 570 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 SERGEFQ9UGK8 458 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 SNX14Q9Y5W7 946 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 hCG_1642624A0A1W2PR95 340 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 EME2A4GXA9 379 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 AQP12BA6NM10 295 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 LGALS16A8MUM7 142 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 PIP5K1BO14986 540 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 TLR5O60602 858 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 JTBO76095 146 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 TTLL1O95922 423 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 CSTBP04080 98 aaKnown RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 CHRM2P08172 466 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 PECAM1P16284 738 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 EGR1P18146 543 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 DRD4P21917 467 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 EPHA3P29320 983 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 PDIA3P30101 505 aaKnown RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 NTSR1P30989 418 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 UQCRC1P31930 480 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 HALP42357 657 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 MMP13P45452 471 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 GATMP50440 423 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 PGDP52209 483 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 BCAT1P54687 386 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 GALNT1Q10472 559 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 BLMHQ13867 455 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 SPARCL1Q14515 664 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 TRIP6Q15654 476 aaKnown RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZRSR2Q15696 482 aaKnown RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 TBCCQ15814 346 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 PFKFB4Q16877 469 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZACNQ401N2 412 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ARHGAP15Q53QZ3 475 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 TMTC4Q5T4D3 741 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAXCQ5TGI0 409 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 PXDC1Q5TGL8 231 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 KIAA1161Q6NSJ0 714 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 MRNIPQ6NTE8 343 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 MZT2AQ6P582 158 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZNF66Q6ZN08 573 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 MAVSQ7Z434 540 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 DTX2Q86UW9 622 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 IZUMO1Q8IYV9 350 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ABRAQ8N0Z2 381 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ANKRD42Q8N9B4 389 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ATG16L2Q8NAA4 619 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ADAMTS15Q8TE58 950 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 GLG1Q92896 1179 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAM227BQ96M60 508 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 HIST1H2AAQ96QV6 131 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 C17orf80Q9BSJ5 609 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 VPS16Q9H269 839 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 SLC25A32Q9H2D1 315 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 GLOD4Q9HC38 313 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 NECTIN3Q9NQS3 549 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 TMOD4Q9NZQ9 345 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 IGSF9Q9P2J2 1179 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 DNAJB11Q9UBS4 358 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 USP22Q9UPT9 525 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 MORC2Q9Y6X9 1032 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 ADGRA2Q96PE1 1338 aa2.86□□□□□ -1.95
HMGB1P35-201ENST00000503360 A1L4Q6 167 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAM90A10PA6NDY2 464 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 VWC2LB2RUY7 222 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 AGPSO00116 658 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 NPC1O15118 1278 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 SLC16A3O15427 465 aaKnown RBP2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 PIP5K1CO60331 668 aa2.85□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCNT2O60583 730 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms