RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 KLHL23Q8NBE8 558 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 SLC7A14Q8TBB6 771 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 FBXO32Q969P5 355 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 MAGOHBQ96A72 148 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 RNF25Q96BH1 459 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 SERPINB11Q96P15 392 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 TTLL2Q9BWV7 592 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 RAB17Q9H0T7 212 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 SMOC2Q9H3U7 446 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 LRRC19Q9H756 370 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 PCSK1NQ9UHG2 260 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 PCYOX1Q9UHG3 505 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 ASB3Q9Y575 518 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 PTPRDP23468 1912 aa8.46□□□□□ -1.05
TOPBP1-202ENST00000503338 ALPK3Q96L96 1907 aa8.46□□□□□ -1.05
TOPBP1-202ENST00000503338 C3orf70A6NLC5 250 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC38A8A6NNN8 435 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 C2CD2LO14523 706 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 NDC80O14777 642 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 LILRB3O75022 631 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 ARL4AP40617 200 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 EPHB3P54753 998 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 CDH6P55285 790 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 BRD3Q15059 726 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 TAF12Q16514 161 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 CCNG2Q16589 344 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 TAZQ16635 292 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SNX30Q5VWJ9 437 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 MSANTD2Q6P1R3 559 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 ELMSAN1Q6PJG2 1045 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 MFSD7Q6UXD7 560 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 RSPO2Q6UXX9 243 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 HFE2Q6ZVN8 426 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 BBS12Q6ZW61 710 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 TMC7Q7Z402 723 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 IFT20Q8IY31 132 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 TCEAL8Q8IYN2 117 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 NOA1Q8NC60 698 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 STKLD1Q8NE28 680 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SCAMP5Q8TAC9 235 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 FAM71BQ8TC56 605 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 CCHCR1Q8TD31 782 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 RAPGEF5Q92565 580 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 HSPH1Q92598 858 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SLCO2A1Q92959 643 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 TRMT2BQ96GJ1 504 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 KRT12Q99456 494 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SNRNP25Q9BV90 132 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 AP1M1Q9BXS5 423 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 FAM129AQ9BZQ8 928 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 UBE2OQ9C0C9 1292 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 WDCPQ9H6R7 721 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 FAM204AQ9H8W3 233 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 CYP4F11Q9HBI6 524 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 DDIT4Q9NX09 232 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 STIM2Q9P246 746 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 DPP7Q9UHL4 492 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC12A6Q9UHW9 1150 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 RAB21Q9UL25 225 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 FZD10Q9ULW2 581 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 AP4E1Q9UPM8 1137 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 NAALADL1Q9UQQ1 740 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC27A5Q9Y2P5 690 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 UTP11Q9Y3A2 253 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 PCDHA11Q9Y5I1 949 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 NLRC5Q86WI3 1866 aa8.46□□□□□ -1.06
TOPBP1-202ENST00000503338 A0A1W2PQH9 124 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 LINC01553A4QN01 128 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CCDC151A5D8V7 595 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CCDC85CA6NKD9 419 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 H3BRJ5 948 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 APOC4-APOC2K7ER74 178 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PRRG1O14668 218 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TEX28O15482 410 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 ADAM12O43184 909 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 IRAK2O43187 625 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 VNN2O95498 520 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CXCL14O95715 111 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 GAS8O95995 478 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 IGLV3-25P01717 112 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 APOC2P02655 101 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 FYNP06241 537 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 RHOXF2BP0C7M4 288 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TCF4P15884 667 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 RPL17P18621 184 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TGM2P21980 687 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TNFRSF8P28908 595 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CCR1P32246 355 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 ADRA1BP35368 520 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 COILP38432 576 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 HCAR3P49019 387 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CXCR3P49682 368 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TUBP50607 506 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 ARSEP51690 589 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 IFRD2Q12894 506 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 NME3Q13232 169 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms