RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ZNF806P0C7X5 589 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 WASP42768 502 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 GOLGA7BQ2TAP0 167 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 TTI2Q6NXR4 508 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 TOGARAM2Q6ZUX3 1019 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 ANKRD52Q8NB46 1076 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 CCDC26Q8TAB7 109 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 UBA3Q8TBC4 463 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 NETO1Q8TDF5 533 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 KAT5Q92993 513 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 DHTKD1Q96HY7 919 aaPredicted RBP17.09■□□□□ 0.33
SCLT1-204ENST00000503215 CNOT6LQ96LI5 555 aaKnown RBP17.09■□□□□ 0.33
SCLT1-204ENST00000503215 ACOX2Q99424 681 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 RTKNQ9BST9 563 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 BBS2Q9BXC9 721 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
SCLT1-204ENST00000503215 PLK2Q9NYY3 685 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 GON4LQ3T8J9 2241 aa17.08■□□□□ 0.33
SCLT1-204ENST00000503215 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.08■□□□□ 0.32
SCLT1-204ENST00000503215 PSMA7O14818 248 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 TYRP14679 529 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 SDHBP21912 280 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 GBP1P32455 592 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 MPLP40238 635 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 FMO5P49326 533 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 PDE4CQ08493 712 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 EFEMP1Q12805 493 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 RAB41Q5JT25 222 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 BHLHA9Q7RTU4 235 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 TERB1Q8NA31 727 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 TFAP2BQ92481 460 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 ZSWIM1Q9BR11 485 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 RASAL2Q9UJF2 1139 aa17.08■□□□□ 0.32
SCLT1-204ENST00000503215 CNOT1A5YKK6 2376 aaKnown RBP17.07■□□□□ 0.32
SCLT1-204ENST00000503215 PRRT4C9JH25 899 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 RNF225M0QZC1 329 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-204ENST00000503215 CACNG3O60359 315 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 GABBR2O75899 941 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 CISD3P0C7P0 127 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 RALAP11233 206 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 CD19P15391 556 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 TKTL1P51854 596 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 STX17P56962 302 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 CREB5Q02930 508 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 MORC3Q14149 939 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 USP39Q53GS9 565 aaKnown RBP17.07■□□□□ 0.32
SCLT1-204ENST00000503215 EGFLAMQ63HQ2 1017 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 ELOA2Q8IYF1 753 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-204ENST00000503215 ZNF276Q8N554 614 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 TTC39CQ8N584 583 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 OLIG1Q8TAK6 271 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 LMO3Q8TAP4 145 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 HMGB4Q8WW32 186 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 ULBP1Q9BZM6 244 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 UBXN6Q9BZV1 441 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 CLIC5Q9NZA1 410 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 MARK1Q9P0L2 795 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
SCLT1-204ENST00000503215 LSM7Q9UK45 103 aaKnown RBP17.07■□□□□ 0.32
SCLT1-204ENST00000503215 TSPAN16Q9UKR8 245 aa17.07■□□□□ 0.32
SCLT1-204ENST00000503215 TCRBV21S2A2A0A5A6 115 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 PSEN1P49768 467 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 YWHAGP61981 247 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCLT1-204ENST00000503215 ELF2Q15723 593 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-204ENST00000503215 EOGTQ5NDL2 527 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 GRAMD4Q6IC98 578 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 ZNF513Q8N8E2 541 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-204ENST00000503215 CEP63Q96MT8 703 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 DNAI2Q9GZS0 605 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 MBD1Q9UIS9 605 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-204ENST00000503215 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-204ENST00000503215 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 PCDHGA5Q9Y5G8 931 aa17.06■□□□□ 0.32
SCLT1-204ENST00000503215 BCLAF3A2AJT9 711 aaKnown RBP17.05■□□□□ 0.32
SCLT1-204ENST00000503215 O00370 1275 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 RHOBTB1O94844 696 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 GOLGA8FQ08AF8 430 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 GOLGA8DPQ0D2H9 430 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 CCDC40Q4G0X9 1142 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 HSF5Q4G112 596 aaPredicted RBP17.05■□□□□ 0.32
SCLT1-204ENST00000503215 SGO2Q562F6 1265 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 PMS2CLQ68D20 193 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 PM20D1Q6GTS8 502 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 KIAA1211LQ6NV74 962 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 C12orf50Q8NA57 414 aaPredicted RBP17.05■□□□□ 0.32
SCLT1-204ENST00000503215 METTL14Q9HCE5 456 aaKnown RBP17.05■□□□□ 0.32
SCLT1-204ENST00000503215 MARCH2Q9P0N8 246 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 WDR35Q9P2L0 1181 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 CLEC4EQ9ULY5 219 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 LAMA1P25391 3075 aa17.05■□□□□ 0.32
SCLT1-204ENST00000503215 A0A1W2PQF6 199 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 SLC12A8A0AV02 714 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 PATE3B3GLJ2 98 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 PIK3R2O00459 728 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 TM4SF5O14894 197 aa17.04■□□□□ 0.32
SCLT1-204ENST00000503215 XPO1O14980 1071 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms