RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 OLIG1Q8TAK6 271 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 OSCP1Q8WVF1 389 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 FAM149B1Q96BN6 582 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 MRFAP1L1Q96HT8 127 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 EPHX3Q9H6B9 360 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 MARCH2Q9P0N8 246 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 RASAL2Q9UJF2 1139 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 STRIP2Q9ULQ0 834 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 TPM1P09493 284 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 SKILP12757 684 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 SCNN1AP37088 669 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 NSFP46459 744 aaKnown RBP16.27■□□□□ 0.2
CPNE1-228ENST00000498814 COG7P83436 770 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 GOLGA8FQ08AF8 430 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 GOLGA8DPQ0D2H9 430 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 TBX2Q13207 712 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-228ENST00000498814 ARID5BQ14865 1188 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 PDGFRLQ15198 375 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 HTR3DQ70Z44 454 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 SLC26A9Q7LBE3 791 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 XYLT1Q86Y38 959 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 PHF13Q86YI8 300 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-228ENST00000498814 MIB1Q86YT6 1006 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 DRC7Q8IY82 874 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 TTC16Q8NEE8 873 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 ASIC4Q96FT7 647 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 PIWIL1Q96J94 861 aaKnown RBP16.27■□□□□ 0.2
CPNE1-228ENST00000498814 ZFYVE19Q96K21 471 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 POPDC2Q9HBU9 364 aa16.27■□□□□ 0.2
CPNE1-228ENST00000498814 SEPT11Q9NVA2 429 aaKnown RBP16.27■□□□□ 0.2
CPNE1-228ENST00000498814 DUS2Q9NX74 493 aaKnown RBP16.27■□□□□ 0.2
CPNE1-228ENST00000498814 SLC9A3R1O14745 358 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-228ENST00000498814 HSF2BPO75031 334 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 SERPING1P05155 500 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 NCAM1P13591 858 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 MLLT6P55198 1093 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-228ENST00000498814 PTP4A2Q12974 167 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 TAF5Q15542 800 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 ACAD10Q6JQN1 1059 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 PPP1R2P3Q6NXS1 205 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 MMS22LQ6ZRQ5 1243 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 TMC6Q7Z403 805 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 OR8K1Q8NGG5 319 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 SLC30A5Q8TAD4 765 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 SLC2A13Q96QE2 648 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 DNAJC7Q99615 494 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 TBC1D14Q9P2M4 693 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 FBXL21Q9UKT6 434 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 NAALADL1Q9UQQ1 740 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 SH3BP1Q9Y3L3 701 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 HBS1LQ9Y450 684 aaKnown RBP16.26■□□□□ 0.19
CPNE1-228ENST00000498814 WNT6Q9Y6F9 365 aa16.26■□□□□ 0.19
CPNE1-228ENST00000498814 MYOFQ9NZM1 2061 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 SLC12A8A0AV02 714 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 CAPN9O14815 690 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 GREM1O60565 184 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 STC2O76061 302 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 IRF1P10914 325 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 GZMAP12544 262 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 IFNAR2P48551 515 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 KPNA1P52294 538 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-228ENST00000498814 EML3Q32P44 896 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 SLC44A4Q53GD3 710 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 C2CD6Q53TS8 623 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 TDRD12Q587J7 1177 aaKnown RBP16.25■□□□□ 0.19
CPNE1-228ENST00000498814 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 CSGALNACT1Q8TDX6 532 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 DQX1Q8TE96 717 aaKnown RBP16.25■□□□□ 0.19
CPNE1-228ENST00000498814 WBP2Q969T9 261 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 PLD4Q96BZ4 506 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 OTUB2Q96DC9 234 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 C11orf70Q9BRQ4 267 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 DCLK3Q9C098 648 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 HPS4Q9NQG7 708 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 ADAM22Q9P0K1 906 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 WDR35Q9P2L0 1181 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 SFMBT1Q9UHJ3 866 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 LSM7Q9UK45 103 aaKnown RBP16.25■□□□□ 0.19
CPNE1-228ENST00000498814 F5P12259 2224 aa16.25■□□□□ 0.19
CPNE1-228ENST00000498814 FAM170AA1A519 330 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 KRBA1A5PL33 1030 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 TMEM221A6NGB7 291 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 M0R296 226 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 DDX3XO00571 662 aaKnown RBP eCLIP16.24■□□□□ 0.19
CPNE1-228ENST00000498814 MFAP3LO75121 409 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 DAB1O75553 588 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 CALB1P05937 261 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 GLULP15104 373 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 GSCP56915 257 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-228ENST00000498814 PRKCQQ04759 706 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 C1QBPQ07021 282 aaKnown RBP16.24■□□□□ 0.19
CPNE1-228ENST00000498814 TNK2Q07912 1038 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 RUNX3Q13761 415 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 TRIP4Q15650 581 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-228ENST00000498814 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 DCAF6Q58WW2 860 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 IER5LQ5T953 404 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 FAM102AQ5T9C2 384 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-228ENST00000498814 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
CPNE1-228ENST00000498814 Q6ZNB5 142 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms