RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CPA6Q8N4T0 437 aa17.54■□□□□ 0.4
PRKCB-210ENST00000498739 ATP2A3Q93084 1043 aa17.54■□□□□ 0.4
PRKCB-210ENST00000498739 PIWIL1Q96J94 861 aaKnown RBP17.54■□□□□ 0.4
PRKCB-210ENST00000498739 LRFN3Q9BTN0 628 aa17.54■□□□□ 0.4
PRKCB-210ENST00000498739 EDEM3Q9BZQ6 932 aa17.54■□□□□ 0.4
PRKCB-210ENST00000498739 SEPT11Q9NVA2 429 aaKnown RBP17.54■□□□□ 0.4
PRKCB-210ENST00000498739 SFMBT1Q9UHJ3 866 aa17.54■□□□□ 0.4
PRKCB-210ENST00000498739 LSM7Q9UK45 103 aaKnown RBP17.54■□□□□ 0.4
PRKCB-210ENST00000498739 TICRRQ7Z2Z1 1910 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 SLC9A3R1O14745 358 aaPredicted RBP17.53■□□□□ 0.4
PRKCB-210ENST00000498739 CAPN9O14815 690 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 CD72P21854 359 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 STARD6P59095 220 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 COG7P83436 770 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 CWF19L1Q69YN2 538 aaKnown RBP17.53■□□□□ 0.4
PRKCB-210ENST00000498739 TRIM72Q6ZMU5 477 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 ERICH1Q86X53 443 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
PRKCB-210ENST00000498739 FBXL6Q8N531 539 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 KIAA1958Q8N8K9 716 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 MSANTD4Q8NCY6 345 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 CPLX3Q8WVH0 158 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 CPA5Q8WXQ8 436 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 AGPAT1Q99943 283 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 TRIM62Q9BVG3 475 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 RBSNQ9H1K0 784 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 C8orf33Q9H7E9 229 aaPredicted RBP17.53■□□□□ 0.4
PRKCB-210ENST00000498739 ECT2Q9H8V3 914 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 TBC1D14Q9P2M4 693 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 NAALADL1Q9UQQ1 740 aa17.53■□□□□ 0.4
PRKCB-210ENST00000498739 ITIH6Q6UXX5 1313 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 A0A1W2PQJ5 194 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 KANSL1LA0AUZ9 987 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 OTOL1A6NHN0 477 aaPredicted RBP17.52■□□□□ 0.4
PRKCB-210ENST00000498739 SPECC1L-ADORA2AF8WAN1 911 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 STC2O76061 302 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 NFATC1O95644 943 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 CYP1A1P04798 512 aaPredicted RBP17.52■□□□□ 0.4
PRKCB-210ENST00000498739 YWHAZP63104 245 aaKnown RBP17.52■□□□□ 0.4
PRKCB-210ENST00000498739 TAF5Q15542 800 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 C2CD6Q53TS8 623 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 EFHC1Q5JVL4 640 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 MSANTD2Q6P1R3 559 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 ZNF852Q6ZMS4 543 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 TOGARAM2Q6ZUX3 1019 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 HTR3DQ70Z44 454 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 IRF2BP2Q7Z5L9 587 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 BBS7Q8IWZ6 715 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 ZNF397Q8NF99 534 aaPredicted RBP17.52■□□□□ 0.4
PRKCB-210ENST00000498739 C18orf8Q96DM3 657 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 IQCDQ96DY2 449 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 PCDHB18PQ96TA0 734 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 POPDC2Q9HBU9 364 aa17.52■□□□□ 0.4
PRKCB-210ENST00000498739 MAN2B1O00754 1011 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 MSI1O43347 362 aaKnown RBP17.51■□□□□ 0.39
PRKCB-210ENST00000498739 GREM1O60565 184 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 TECTAO75443 2155 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 GRAP2O75791 330 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 FYNP06241 537 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 GLULP15104 373 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 CTHP32929 405 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 MLLT6P55198 1093 aaPredicted RBP17.51■□□□□ 0.39
PRKCB-210ENST00000498739 SLC6A3Q01959 620 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 NR1H3Q13133 447 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 UBXN2BQ14CS0 331 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 SYPL2Q5VXT5 272 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 E4F1Q66K89 784 aaPredicted RBP17.51■□□□□ 0.39
PRKCB-210ENST00000498739 OLFML1Q6UWY5 402 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 RALGPS2Q86X27 583 aaPredicted RBP17.51■□□□□ 0.39
PRKCB-210ENST00000498739 GAS2L3Q86XJ1 694 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 ZDHHC17Q8IUH5 632 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 ADGRG2Q8IZP9 1017 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 SLC30A5Q8TAD4 765 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 DQX1Q8TE96 717 aaKnown RBP17.51■□□□□ 0.39
PRKCB-210ENST00000498739 FAM3CQ92520 227 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 PLD4Q96BZ4 506 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 OTUB2Q96DC9 234 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 MSANTD3Q96H12 275 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 DDX23Q9BUQ8 820 aaKnown RBP17.51■□□□□ 0.39
PRKCB-210ENST00000498739 FOXQ1Q9C009 403 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 ASNSD1Q9NWL6 643 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 AIPL1Q9NZN9 384 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 HBS1LQ9Y450 684 aaKnown RBP17.51■□□□□ 0.39
PRKCB-210ENST00000498739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.51■□□□□ 0.393e-8■□□□□ 9.7
PRKCB-210ENST00000498739 NCOR1O75376 2440 aa17.51■□□□□ 0.39
PRKCB-210ENST00000498739 SHISA7A6NL88 538 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 HSF2BPO75031 334 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 GYPCP04921 128 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 CYP17A1P05093 508 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 GLI1P08151 1106 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 UNGP13051 313 aaPredicted RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 TNFAIP3P21580 790 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 CORO1AP31146 461 aaKnown RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 NSFP46459 744 aaKnown RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 GABRB2P47870 512 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 KLHL30Q0D2K2 578 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 CLEC16AQ2KHT3 1053 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 SPECC1LQ69YQ0 1117 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 ASTLQ6HA08 431 aaPredicted RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 MMS22LQ6ZRQ5 1243 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 394.6 ms