RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MTMR9Q96QG7 549 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 TAAR1Q96RJ0 339 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 RANBP9Q96S59 729 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 RMDN3Q96TC7 470 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 WDR11Q9BZH6 1224 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PAIP1Q9H074 479 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CDH19Q9H159 772 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 IKZF4Q9H2S9 585 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 DSEQ9UL01 958 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 TIAM2Q8IVF5 1701 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SCN9AQ15858 1988 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 NAV1Q8NEY1 1877 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SMIM31A0A1B0GVY4 71 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PSMD11O00231 422 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 DDX3YO15523 660 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 EDF1O60869 148 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 TPPPO94811 219 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 GAS8O95995 478 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 ESRRAP11474 423 aaPredicted RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 ATF4P18848 351 aaPredicted RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CTHP32929 405 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PGM1P36871 562 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 MLLT10P55197 1068 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 KDSRQ06136 332 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 AP3B2Q13367 1082 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 HNRNPDQ14103 355 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SLC18A3Q16572 532 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RALGPS1Q5JS13 557 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 C6orf52Q5T4I8 152 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 UNC13DQ70J99 1090 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 FAM160B2Q86V87 743 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SAMD14Q8IZD0 417 aaPredicted RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 GPC2Q8N158 579 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 VPS52Q8N1B4 723 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 LILRB1Q8NHL6 650 aaPredicted RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 MCUR1Q96AQ8 359 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 COX4I2Q96KJ9 171 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 FAM20AQ96MK3 541 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 ZMAT2Q96NC0 199 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 NAP1L3Q99457 506 aaPredicted RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 KLF6Q99612 283 aaPredicted RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 THTPAQ9BU02 230 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 LUC7LQ9NQ29 371 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SMYD2Q9NRG4 433 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RNF146Q9NTX7 359 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 TBCCD1Q9NVR7 557 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 HACD3Q9P035 362 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PCDH10Q9P2E7 1040 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 STK17AQ9UEE5 414 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 FEM1BQ9UK73 627 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CSADQ9Y600 493 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 ADAMTSL1Q8N6G6 1762 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 LAMA2P24043 3122 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CNTNAP1P78357 1384 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 BTBD19C9JJ37 291 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 XPO1O14980 1071 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 TRPA1O75762 1119 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SLC4A1P02730 911 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CD48P09326 243 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 FOSL1P15407 271 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PRKACBP22694 351 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 HOXD10P28358 340 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 NMT1P30419 496 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 YWHAGP61981 247 aaKnown RBP eCLIP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RPS6P62753 249 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 TMED2Q15363 201 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 FAM214AQ32MH5 1076 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PRPF38BQ5VTL8 546 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CES4AQ5XG92 561 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RNF207Q6ZRF8 634 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RGS9BPQ6ZS82 235 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 LHFPL2Q6ZUX7 228 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 DSG4Q86SJ6 1040 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RALGPS2Q86X27 583 aaPredicted RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CADM3Q8N126 398 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 ANKRD35Q8N283 1001 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RASGEF1CQ8N431 466 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 ESX1Q8N693 406 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PRELID2Q8N945 189 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 GMCL1P1Q8NEA9 526 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CFAP61Q8NHU2 1237 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 GDPD5Q8WTR4 605 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PSPC1Q8WXF1 523 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 HPS1Q92902 700 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 WNK4Q96J92 1243 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 C9orf72Q96LT7 481 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 FRMD6Q96NE9 622 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RBM15Q96T37 977 aaKnown RBP eCLIP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SH3GL1Q99961 368 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 TEKT3Q9BXF9 490 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SLC2A11Q9BYW1 496 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 NMUR2Q9GZQ4 415 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 NAA50Q9GZZ1 169 aaKnown RBP5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PCIF1Q9H4Z3 704 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 ELP3Q9H9T3 547 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 NDE1Q9NXR1 346 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 RRN3Q9NYV6 651 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 SEL1LQ9UBV2 794 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 CARD8Q9Y2G2 431 aa5.99□□□□□ -1.45
SOX2-OT-218ENST00000498731 PRKAB1Q9Y478 270 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms