RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 DCAF6Q58WW2 860 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 FAM91A1Q658Y4 838 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 MIER3Q7Z3K6 550 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 CROCCP3Q8IVE0 287 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 DDHD1Q8NEL9 900 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 FEZF2Q8TBJ5 459 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 PIWIL2Q8TC59 973 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ACTRT2Q8TDY3 377 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ATP2A3Q93084 1043 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 FAF2Q96CS3 445 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 PKP2Q99959 881 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 HEPHQ9BQS7 1158 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 TMEM206Q9H813 350 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 DDX4Q9NQI0 724 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 AVENQ9NQS1 362 aaPredicted RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ARHGAP26Q9UNA1 814 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 KIF13BQ9NQT8 1826 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 CD1EP15812 388 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 C21orf59P57076 290 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 TGFBIQ15582 683 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 PDCD4Q53EL6 469 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 TFDP3Q5H9I0 405 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 CALN1Q9BXU9 219 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 TBX3O15119 743 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 AP1G1O43747 822 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 XRCC1P18887 633 aaPredicted RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 TNNI1P19237 187 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ETFBP38117 255 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ZNF362Q5T0B9 420 aaPredicted RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 FAM102BQ5T8I3 360 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 OTOP1Q7RTM1 612 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 KBTBD6Q86V97 674 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 NAT8LQ8N9F0 302 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 DHRS4Q9BTZ2 278 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 WDR18Q9BV38 432 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 GLT8D2Q9H1C3 349 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ZNF696Q9H7X3 374 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 ZC3H7BQ9UGR2 993 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 RAB26Q9ULW5 256 aa13.51□□□□□ -0.25
GAPVD1-220ENST00000497580 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 CNTNAP2Q9UHC6 1331 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 hCG_1818297A0A087WSY0 165 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 PTPN1P18031 435 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 GNA15P30679 374 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 SLC1A6P48664 564 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 BRDTQ58F21 947 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 LGSNQ5TDP6 509 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 TRPV6Q9H1D0 765 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 THAP1Q9NVV9 213 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 EPS15L1Q9UBC2 864 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 STX16-NPEPL1H3BU86 382 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 MATN2O00339 956 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 ZC3H11AO75152 810 aaKnown RBP eCLIP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 LDHAP00338 332 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 PRELPP51888 382 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 NDST2P52849 883 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 NUP107P57740 925 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 DMPKQ09013 629 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 ADGRE1Q14246 886 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 PPP2R5DQ14738 602 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 SLC15A2Q16348 729 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 NFIL3Q16649 462 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 WDR44Q5JSH3 913 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 CYP4A22Q5TCH4 519 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 DNAJC24Q6P3W2 148 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 GPR141Q7Z602 305 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 ZNF577Q9BSK1 485 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 RNPEPQ9H4A4 650 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 C6orf203Q9P0P8 240 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 CDC14AQ9UNH5 594 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 A0A0B4J269 797 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 KANSL1LA0AUZ9 987 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 FUCA1P04066 466 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 BPGMP07738 259 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 PIM1P11309 404 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 COX4I1P13073 169 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 P4HA1P13674 534 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 CDK9P50750 372 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 THOP1P52888 689 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 ESRRGP62508 458 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 WASHC5Q12768 1159 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 TEX44Q53QW1 395 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 PPM1LQ5SGD2 360 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 PLEKHA7Q6IQ23 1121 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 DARS2Q6PI48 645 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 SLC2A7Q6PXP3 512 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 MON1BQ7L1V2 547 aa13.5□□□□□ -0.25
GAPVD1-220ENST00000497580 SLC9A9Q8IVB4 645 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms