RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TRPC7Q9HCX4 862 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 ZMYM5Q9UJ78 669 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 MAP1BP46821 2468 aaKnown RBP20.98■□□□□ 0.95
CTSD-206ENST00000497544 SOBPA7XYQ1 873 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 LTFP02788 710 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 RARGP13631 454 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 FECHP22830 423 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 MON1BQ7L1V2 547 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 OTOP3Q7RTS5 596 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 PHLDB2Q86SQ0 1253 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 RNF139Q8WU17 664 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 ACSF2Q96CM8 615 aaPredicted RBP20.98■□□□□ 0.95
CTSD-206ENST00000497544 RPGRIP1Q96KN7 1286 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 PHF7Q9BWX1 381 aaPredicted RBP20.98■□□□□ 0.95
CTSD-206ENST00000497544 ABCC13Q9NSE7 274 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 CLIC5Q9NZA1 410 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 CDH7Q9ULB5 785 aa20.98■□□□□ 0.95
CTSD-206ENST00000497544 OBSL1O75147 1896 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 GOLGA8SH3BPF8 625 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 NRG2O14511 850 aaPredicted RBP20.97■□□□□ 0.95
CTSD-206ENST00000497544 PTMAP06454 111 aaKnown RBP20.97■□□□□ 0.95
CTSD-206ENST00000497544 GLI1P08151 1106 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 PFKLP17858 780 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 HDCP19113 662 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 PGFP49763 221 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 YWHAZP63104 245 aaKnown RBP20.97■□□□□ 0.95
CTSD-206ENST00000497544 PTP4A2Q12974 167 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 OLFML1Q6UWY5 402 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 RSRC2Q7L4I2 434 aaKnown RBP20.97■□□□□ 0.95
CTSD-206ENST00000497544 BHLHA9Q7RTU4 235 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 TADA2BQ86TJ2 420 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 NPAS3Q8IXF0 933 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 CDK5RAP1Q96SZ6 601 aaKnown RBP20.97■□□□□ 0.95
CTSD-206ENST00000497544 TRIM62Q9BVG3 475 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 SLC46A2Q9BY10 475 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 NACA2Q9H009 215 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 SPTLC3Q9NUV7 552 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.97■□□□□ 0.95
CTSD-206ENST00000497544 ASNSD1Q9NWL6 643 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 OSER1Q9NX31 292 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 GDE1Q9NZC3 331 aa20.97■□□□□ 0.95
CTSD-206ENST00000497544 ZFP37Q9Y6Q3 630 aaPredicted RBP20.97■□□□□ 0.95
CTSD-206ENST00000497544 CEP250Q9BV73 2442 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 TRAV19A0A0A6YYK7 116 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 CAPN9O14815 690 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 NRDCO43847 1150 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 TLR5O60602 858 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 ATP5C1P36542 298 aaKnown RBP20.96■□□□□ 0.95
CTSD-206ENST00000497544 SCNN1AP37088 669 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 TUBP50607 506 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 RNASE9P60153 205 aaKnown RBP20.96■□□□□ 0.95
CTSD-206ENST00000497544 STXBP5Q5T5C0 1151 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 FAM102AQ5T9C2 384 aaPredicted RBP20.96■□□□□ 0.95
CTSD-206ENST00000497544 DNAAF5Q86Y56 855 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 EDEM1Q92611 657 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 TRIM11Q96F44 468 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 MYADMQ96S97 322 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 SELENOOQ9BVL4 669 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 USTQ9Y2C2 406 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 NR2E1Q9Y466 385 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 DOCK8Q8NF50 2099 aa20.96■□□□□ 0.95
CTSD-206ENST00000497544 C2orf78A6NCI8 922 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 SOWAHDA6NJG2 315 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 HSF2BPO75031 334 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 GRAP2O75791 330 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 OAS1P00973 400 aaKnown RBP20.95■□□□□ 0.94
CTSD-206ENST00000497544 MYBL1P10243 752 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 SP100P23497 879 aaPredicted RBP20.95■□□□□ 0.94
CTSD-206ENST00000497544 AVPR1AP37288 418 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 SPA17Q15506 151 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 C10orf120Q5SQS8 335 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 SLC26A9Q7LBE3 791 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 LRRC8AQ8IWT6 810 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 ZNF276Q8N554 614 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 ARL14EPQ8N8R7 260 aaPredicted RBP20.95■□□□□ 0.94
CTSD-206ENST00000497544 ZNF653Q96CK0 615 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 PDLIM2Q96JY6 352 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 ZSWIM3Q96MP5 696 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 CYP2S1Q96SQ9 504 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 CCSER2Q9H7U1 834 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 POPDC2Q9HBU9 364 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 OLA1Q9NTK5 396 aaKnown RBP20.95■□□□□ 0.94
CTSD-206ENST00000497544 NUDT5Q9UKK9 219 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 EPN1Q9Y6I3 576 aaPredicted RBP20.95■□□□□ 0.94
CTSD-206ENST00000497544 FRYLO94915 3013 aa20.95■□□□□ 0.94
CTSD-206ENST00000497544 IPO7O95373 1038 aaKnown RBP20.94■□□□□ 0.94
CTSD-206ENST00000497544 H2AFZP0C0S5 128 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 MBL2P11226 248 aaPredicted RBP20.94■□□□□ 0.94
CTSD-206ENST00000497544 LAMP2P13473 410 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 NCAM1P13591 858 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 ABCB4P21439 1286 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 GALCP54803 685 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 PUM1Q14671 1186 aaKnown RBP eCLIP20.94■□□□□ 0.94
CTSD-206ENST00000497544 TAF5Q15542 800 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 C10orf76Q5T2E6 689 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 H2AFVQ71UI9 128 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 ARID3BQ8IVW6 561 aaPredicted RBP20.94■□□□□ 0.94
CTSD-206ENST00000497544 CMTM8Q8IZV2 173 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 PLCD3Q8N3E9 789 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 C3orf20Q8ND61 904 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms