RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 C7orf26Q96N11 449 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 BAG1Q99933 345 aaPredicted RBP4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 C7orf25Q9BPX7 421 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 SLF1Q9BQI6 1058 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 DESI2Q9BSY9 194 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 BDH2Q9BUT1 245 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 BRIP1Q9BX63 1249 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 KRTAP17-1Q9BYP8 105 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 TXLNGYQ9BZA5 131 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 PREBQ9HCU5 417 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 LANCL2Q9NS86 450 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 MYO1AQ9UBC5 1043 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 CPNE7Q9UBL6 633 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 SRP68Q9UHB9 627 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 FEM1BQ9UK73 627 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 CNOT11Q9UKZ1 510 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 OGDHLQ9ULD0 1010 aa4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 NAP1L2Q9ULW6 460 aaPredicted RBP4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 CFAP20Q9Y6A4 193 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-208ENST00000496910 SCN4AP35499 1836 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 KDM6AO15550 1401 aaPredicted RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 GPRASP1Q5JY77 1395 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 PIK3R4Q99570 1358 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MYBBP1AQ9BQG0 1328 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 PI4KAP2A4QPH2 592 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 LRRC14BA6NHZ5 514 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 GRXCR1A8MXD5 290 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 NT5C1B-RDH14C9J2C7 533 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 GPR32O75388 356 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 TNFRSF6BO95407 300 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 SGPL1O95470 568 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 HSPA4LO95757 839 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 KITP10721 976 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 RARBP10826 455 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MYCLP12524 364 aaPredicted RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 IDEP14735 1019 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 FGFR2P21802 821 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 SLC6A4P31645 630 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 HOXD13P35453 343 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 PTTG1IPP53801 180 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 CASP6P55212 293 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 KRTAP10-2P60368 255 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 NKX6-1P78426 367 aaPredicted RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 EFEMP1Q12805 493 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 CDC16Q13042 620 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MAPK7Q13164 816 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 PTK2BQ14289 1009 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 FGL2Q14314 439 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 BECN1Q14457 450 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 DLGAP5Q15398 846 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 TSTQ16762 297 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 SLC9C2Q5TAH2 1124 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 AFMIDQ63HM1 303 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 METRNLQ641Q3 311 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 SULT6B1Q6IMI4 303 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 SLC30A6Q6NXT4 461 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 RPUSD3Q6P087 351 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 GLB1LQ6UWU2 654 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MFSD6Q6ZSS7 791 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MIGA2Q7L4E1 593 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 VSIG1Q86XK7 387 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 PLXDC1Q8IUK5 500 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 SYT12Q8IV01 421 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 RHOT1Q8IXI2 618 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 ZNF808Q8N4W9 903 aaPredicted RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 TTC9BQ8N6N2 239 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 ATP11CQ8NB49 1132 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MDGA1Q8NFP4 955 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 OR5M3Q8NGP4 307 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 IPO4Q8TEX9 1081 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 STON2Q8WXE9 905 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 CYFIP2Q96F07 1278 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MSLNLQ96KJ4 702 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MPHOSPH9Q99550 1183 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 MYOCQ99972 504 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 ADPGKQ9BRR6 497 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 ARHGAP39Q9C0H5 1083 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 HAUS2Q9NVX0 235 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 TMEM160Q9NX00 188 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 IGSF9Q9P2J2 1179 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 NCDNQ9UBB6 729 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 CFDP1Q9UEE9 299 aaPredicted RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 SCAF8Q9UPN6 1271 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 ACTL7AQ9Y615 435 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 ADAMTSL1Q8N6G6 1762 aa4.07□□□□□ -1.76
EXOSC3-208ENST00000496910 COL4A5P29400 1685 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 NOTCH2Q04721 2471 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CCDC18Q5T9S5 1454 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 KIAA1107Q9UPP5 1409 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 MYO15AQ9UKN7 3530 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 PLEKHG1Q9ULL1 1385 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CFAP46Q8IYW2 2715 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CHL1O00533 1208 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 PJA2O43164 708 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 FOXD2O60548 495 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 ZNF623O75123 536 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 PTP4A3O75365 173 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 RTN3O95197 1032 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 STARD3NLO95772 234 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms