RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 CLIC5Q9NZA1 410 aa14.12□□□□□ -0.15
PTPN7-218ENST00000496197 WDR35Q9P2L0 1181 aa14.12□□□□□ -0.15
PTPN7-218ENST00000496197 TRIM10Q9UDY6 481 aa14.12□□□□□ -0.15
PTPN7-218ENST00000496197 CCL26Q9Y258 94 aa14.12□□□□□ -0.15
PTPN7-218ENST00000496197 DUSP10Q9Y6W6 482 aa14.12□□□□□ -0.15
PTPN7-218ENST00000496197 TCF20Q9UGU0 1960 aaKnown RBP14.11□□□□□ -0.15
PTPN7-218ENST00000496197 C2CD4BA6NLJ0 364 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 ZNF197O14709 1029 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 SART1O43290 800 aaKnown RBP14.11□□□□□ -0.15
PTPN7-218ENST00000496197 MSI1O43347 362 aaKnown RBP14.11□□□□□ -0.15
PTPN7-218ENST00000496197 FGF19O95750 216 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 GLI1P08151 1106 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 MYBL1P10243 752 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 KRT3P12035 628 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 PPP3CCP48454 512 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 PSEN1P49768 467 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 TUBP50607 506 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 ATXN1P54253 815 aaKnown RBP14.11□□□□□ -0.15
PTPN7-218ENST00000496197 SNX16P57768 344 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 SPA17Q15506 151 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 C15orf59Q2T9L4 293 aaPredicted RBP14.11□□□□□ -0.15
PTPN7-218ENST00000496197 DCAF6Q58WW2 860 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 HECTD3Q5T447 861 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 PTCRAQ6ISU1 281 aaPredicted RBP14.11□□□□□ -0.15
PTPN7-218ENST00000496197 TAC4Q86UU9 113 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 CPNE8Q86YQ8 564 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 ARHGAP18Q8N392 663 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 ADAMTS19Q8TE59 1207 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 DQX1Q8TE96 717 aaKnown RBP14.11□□□□□ -0.15
PTPN7-218ENST00000496197 RXFP2Q8WXD0 754 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 RSPRY1Q96DX4 576 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 TRIM11Q96F44 468 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 GCNAQ96QF7 691 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 NUP85Q9BW27 656 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 TASP1Q9H6P5 420 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 PYCARDQ9ULZ3 195 aa14.11□□□□□ -0.15
PTPN7-218ENST00000496197 TMEM191CA6NGB0 347 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 IGLV3-25P01717 112 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 FCARP24071 287 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 MATKP42679 507 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 VAV2P52735 878 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 EFEMP1Q12805 493 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 SMAD2Q15796 467 aaKnown RBP14.1□□□□□ -0.15
PTPN7-218ENST00000496197 CCDC14Q49A88 953 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 C10orf120Q5SQS8 335 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 DAB2IPQ5VWQ8 1189 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 MSANTD2Q6P1R3 559 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 CMTM8Q8IZV2 173 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 CTNNBL1Q8WYA6 563 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-218ENST00000496197 NT5C3BQ969T7 300 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 TBCBQ99426 244 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 NPY6RQ99463 290 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 DDX23Q9BUQ8 820 aaKnown RBP14.1□□□□□ -0.15
PTPN7-218ENST00000496197 SLITRK6Q9H5Y7 841 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 GKN1Q9NS71 199 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 PARVAQ9NVD7 372 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 SMPD4Q9NXE4 827 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPN7-218ENST00000496197 RASAL2Q9UJF2 1139 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 CDH7Q9ULB5 785 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 INTUQ9ULD6 942 aa14.1□□□□□ -0.15
PTPN7-218ENST00000496197 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPN7-218ENST00000496197 CAPN9O14815 690 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 CCP110O43303 1012 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 RALAP11233 206 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 HDCP19113 662 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 NOS2P35228 1153 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 EIF4EBP2Q13542 120 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-218ENST00000496197 ARHGAP15Q53QZ3 475 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 FAM78AQ5JUQ0 283 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 C10orf76Q5T2E6 689 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 RSRC2Q7L4I2 434 aaKnown RBP14.09□□□□□ -0.15
PTPN7-218ENST00000496197 BEND5Q7L4P6 421 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 ARCQ7LC44 396 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 BNIPLQ7Z465 357 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 MIB1Q86YT6 1006 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 ZNF276Q8N554 614 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 ZSCAN18Q8TBC5 510 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-218ENST00000496197 SLC35G2Q8TBE7 412 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 GOLGA1Q92805 767 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 USP13Q92995 863 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-218ENST00000496197 ASB16Q96NS5 453 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 NECTIN4Q96NY8 510 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 LRRC3BQ96PB8 259 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 SMOC2Q9H3U7 446 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 CPQQ9Y646 472 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 SCINQ9Y6U3 715 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 COL4A3Q01955 1670 aa14.09□□□□□ -0.15
PTPN7-218ENST00000496197 SYNJ2BP-COX16A0A087WUM0 186 aa14.08□□□□□ -0.16
PTPN7-218ENST00000496197 TRAV19A0A0A6YYK7 116 aa14.08□□□□□ -0.16
PTPN7-218ENST00000496197 C2CD4DB7Z1M9 353 aa14.08□□□□□ -0.16
PTPN7-218ENST00000496197 SCAMP3O14828 347 aaKnown RBP14.08□□□□□ -0.16
PTPN7-218ENST00000496197 PJA2O43164 708 aa14.08□□□□□ -0.16
PTPN7-218ENST00000496197 TRUB2O95900 331 aaKnown RBP14.08□□□□□ -0.16
PTPN7-218ENST00000496197 CKMP06732 381 aa14.08□□□□□ -0.16
PTPN7-218ENST00000496197 MBL2P11226 248 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-218ENST00000496197 PDGFRAP16234 1089 aa14.08□□□□□ -0.16
PTPN7-218ENST00000496197 GPD1P21695 349 aa14.08□□□□□ -0.16
PTPN7-218ENST00000496197 DDX6P26196 483 aaKnown RBP eCLIP14.08□□□□□ -0.16
PTPN7-218ENST00000496197 GBP2P32456 591 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms