RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RCOR3Q9P2K3 495 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 DDX20Q9UHI6 824 aaKnown RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 AP4E1Q9UPM8 1137 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 R3HDM2Q9Y2K5 976 aaKnown RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 NEU2Q9Y3R4 380 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 MYADML2A6NDP7 307 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SMIM23A6NLE4 172 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 HACD1B0YJ81 288 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 RNF223E7ERA6 249 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 H0YGN5 161 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 EBAG9O00559 213 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 NDUFAB1O14561 156 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 PPEF2O14830 753 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SPAG6O75602 509 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 GRAP2O75791 330 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KIAA0754O94854 1291 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 ACSL3O95573 720 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 TSHRP16473 764 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 PTPN1P18031 435 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 KLRC2P26717 231 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 NOS2P35228 1153 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 MDH1P40925 334 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 MATKP42679 507 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 NR2C2P49116 596 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 MAGOHP61326 146 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 BASP1P80723 227 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 SARNPP82979 210 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 RNASELQ05823 741 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 MGAT3Q09327 533 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 XRCC4Q13426 336 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 TUSC3Q13454 348 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 ITGA7Q13683 1181 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 OASLQ15646 514 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 TAZQ16635 292 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 HIF1AQ16665 826 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KLHL38Q2WGJ6 581 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 ATP13A4Q4VNC1 1196 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 MDH1BQ5I0G3 518 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 EFHC2Q5JST6 749 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KCNT1Q5JUK3 1230 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 EMC10Q5UCC4 262 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 MFSD5Q6N075 450 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 CYP4F22Q6NT55 531 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 PMF1Q6P1K2 205 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 RHBDF2Q6PJF5 856 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 C4orf50Q6ZRC1 276 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 MRPL10Q7Z7H8 261 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 ZDHHC14Q8IZN3 488 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 PDIK1LQ8N165 341 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SH2D3CQ8N5H7 860 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 ATP11CQ8NB49 1132 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 RNF169Q8NCN4 708 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KLHDC9Q8NEP7 349 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 TRPV1Q8NER1 839 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 OR2W6PQ8NHA6 318 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SLC35B2Q8TB61 432 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SLC2A14Q8TDB8 520 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 BCAS4Q8TDM0 211 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KBTBD7Q8WVZ9 684 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 RSPH1Q8WYR4 309 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KCTD13Q8WZ19 329 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 FAM193BQ96PV7 902 aaPredicted RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 RNF157Q96PX1 679 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 RBM15Q96T37 977 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP39-219ENST00000496047 GAD1Q99259 594 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 TMEM121Q9BTD3 319 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SNRNP25Q9BV90 132 aaKnown RBP7.2□□□□□ -1.26
USP39-219ENST00000496047 FTHL17Q9BXU8 183 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 DPEP3Q9H4B8 488 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 GOLGA2P5Q9HBQ8 144 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SAYSD1Q9NPB0 183 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 CNGB3Q9NQW8 809 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KRT82Q9NSB4 513 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SENP1Q9P0U3 644 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 KANSL3Q9P2N6 904 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 TJP2Q9UDY2 1190 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SRRDQ9UH36 339 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 FKBPLQ9UIM3 349 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 GABRQQ9UN88 632 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 NFS1Q9Y697 457 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 TTC3P53804 2025 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 SCN5AQ14524 2016 aa7.2□□□□□ -1.26
USP39-219ENST00000496047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 EXOC1LA0A1B0GW35 172 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 ARL5CA6NH57 179 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 C3orf70A6NLC5 250 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 PIK3R2O00459 728 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PTGESO14684 152 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PPP1R12AO14974 1030 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 PAPSS1O43252 624 aaPredicted RBP7.19□□□□□ -1.26
USP39-219ENST00000496047 TRAPPC3O43617 180 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 ZNF623O75123 536 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 EOMESO95936 686 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 F9P00740 461 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 PFKMP08237 780 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 GHRP10912 638 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 IL1R2P27930 398 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 CD52P31358 61 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 MAGEA4P43358 317 aa7.19□□□□□ -1.26
USP39-219ENST00000496047 RPL34P49207 117 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms