RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ABLIM2Q6H8Q1 611 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 SULT6B1Q6IMI4 303 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 ZNF425Q6IV72 752 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 MRNIPQ6NTE8 343 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 PTF1AQ7RTS3 328 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 RASGRP3Q8IV61 690 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 LRRC71Q8N4P6 559 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 LTV1Q96GA3 475 aaPredicted RBP5.17□□□□□ -1.58
SMC4-224ENST00000494612 PAGR1Q9BTK6 254 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 MAGEH1Q9H213 219 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 KLC4Q9NSK0 619 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 ZNF70Q9UC06 446 aaPredicted RBP5.17□□□□□ -1.58
SMC4-224ENST00000494612 AOX1Q06278 1338 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 J3KTA2 159 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 PSMD9O00233 223 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 DNPH1O43598 174 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 KLRK1P26718 216 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 AKT1P31749 480 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 TIRAPP58753 221 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 TAF5Q15542 800 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 MZT2AQ6P582 158 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 USP17L6PQ6QN14 398 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 PEG10Q86TG7 708 aaKnown RBP5.16□□□□□ -1.58
SMC4-224ENST00000494612 MYRIPQ8NFW9 859 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 OR1N1Q8NGS0 311 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 ABHD5Q8WTS1 349 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 SCLT1Q96NL6 688 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 MYLK2Q9H1R3 596 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 CPNE5Q9HCH3 593 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 NECTIN3Q9NQS3 549 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 EHD3Q9NZN3 535 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMC4-224ENST00000494612 VPS51Q9UID3 782 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 RIMKLBQ9ULI2 386 aa5.16□□□□□ -1.58
SMC4-224ENST00000494612 WDR91A4D1P6 747 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 CES2O00748 559 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 PDE8BO95263 885 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 VIPP01282 170 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 EBLN1P0CF75 366 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 ENGP17813 658 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 GPD1P21695 349 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 SERPINF1P36955 418 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 PBX1P40424 430 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 SOX10P56693 466 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 NSUN2Q08J23 767 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMC4-224ENST00000494612 BMPR2Q13873 1038 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 PTK2BQ14289 1009 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 GRM4Q14833 912 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 POSTNQ15063 836 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 PTPRRQ15256 657 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 NBPF8Q3BBV2 869 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 KIAA1614Q5VZ46 1190 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 SUGP1Q8IWZ8 645 aaKnown RBP5.15□□□□□ -1.59
SMC4-224ENST00000494612 CACNA2D3Q8IZS8 1091 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 NKAPQ8N5F7 415 aaKnown RBP5.15□□□□□ -1.59
SMC4-224ENST00000494612 FAM71BQ8TC56 605 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 HASPINQ8TF76 798 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 RUBCNQ92622 972 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 RFKQ969G6 155 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 TRIM63Q969Q1 353 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 TBC1D20Q96BZ9 403 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 VN1R3Q9BXE9 311 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 MLXIPQ9HAP2 919 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 ARHGEF3Q9NR81 526 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 RGS17Q9UGC6 210 aaPredicted RBP5.15□□□□□ -1.59
SMC4-224ENST00000494612 DTNAQ9Y4J8 743 aa5.15□□□□□ -1.59
SMC4-224ENST00000494612 PNMA6EA0A0J9YXQ4 647 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 MANSC4A6NHS7 340 aaPredicted RBP5.14□□□□□ -1.59
SMC4-224ENST00000494612 LINC00473A8K010 186 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 PCDH17O14917 1159 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 CA12O43570 354 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 CREB3O43889 395 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 NPPBP16860 134 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 DRD1P21728 446 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 RBL1P28749 1068 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 CYP2C18P33260 490 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 GRK6P43250 576 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 TIAL1Q01085 375 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMC4-224ENST00000494612 E2F1Q01094 437 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 BFSP2Q13515 415 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 ATP1A4Q13733 1029 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 ZNF618Q5T7W0 954 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 ARL6IP4Q66PJ3 421 aaKnown RBP5.14□□□□□ -1.59
SMC4-224ENST00000494612 JMJD6Q6NYC1 403 aaPredicted RBP5.14□□□□□ -1.59
SMC4-224ENST00000494612 TLDC1Q6P9B6 456 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 LDHAL6AQ6ZMR3 332 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 P3H2Q8IVL5 708 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 CCDC117Q8IWD4 279 aaPredicted RBP5.14□□□□□ -1.59
SMC4-224ENST00000494612 SPATA5Q8NB90 893 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 SOCS4Q8WXH5 440 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 DDB2Q92466 427 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 ZNF668Q96K58 619 aaPredicted RBP5.14□□□□□ -1.59
SMC4-224ENST00000494612 PRR25Q96S07 402 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 FSCN3Q9NQT6 498 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 ITM2CQ9NQX7 267 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 LUZP4Q9P127 313 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 ADAM21Q9UKJ8 722 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 ASAP1Q9ULH1 1129 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 CCDC180Q9P1Z9 1646 aa5.14□□□□□ -1.59
SMC4-224ENST00000494612 WDR27A2RRH5 827 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms