RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 JAK3P52333 1124 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 GPC5P78333 572 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 ZXDBP98169 803 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 B4GALNT1Q00973 533 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 TIAL1Q01085 375 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMC4-223ENST00000493695 CCDC15Q0P6D6 951 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 ASIC2Q16515 512 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 ST3GAL2Q16842 350 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 EARS2Q5JPH6 523 aaKnown RBP5.03□□□□□ -1.6
SMC4-223ENST00000493695 RFX8Q6ZV50 586 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 UBE2Q1Q7Z7E8 422 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 ADGRF4Q8IZF3 695 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 ZNF479Q96JC4 524 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 LMLNQ96KR4 655 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 FCRL5Q96RD9 977 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 CINPQ9BW66 212 aaPredicted RBP5.03□□□□□ -1.6
SMC4-223ENST00000493695 SLC12A5Q9H2X9 1139 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 SMURF2Q9HAU4 748 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 NMRK2Q9NPI5 230 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 TRIM36Q9NQ86 728 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 GAR1Q9NY12 217 aaKnown RBP5.03□□□□□ -1.6
SMC4-223ENST00000493695 MDFICQ9P1T7 246 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 GABBR1Q9UBS5 961 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 STEAP1Q9UHE8 339 aa5.03□□□□□ -1.6
SMC4-223ENST00000493695 H3BML4 177 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 UGDHO60701 494 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 PDGFRBP09619 1106 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 BRAFP15056 766 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 TPH1P17752 444 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 TNFRSF1BP20333 461 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 KCNJ4P48050 445 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 ARHGEF7Q14155 803 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 SLC29A2Q14542 456 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 COL23A1Q86Y22 540 aaPredicted RBP5.02□□□□□ -1.61
SMC4-223ENST00000493695 METTL25Q8N6Q8 603 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 HIST1H2AAQ96QV6 131 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 ACO2Q99798 780 aaKnown RBP5.02□□□□□ -1.61
SMC4-223ENST00000493695 TUBB6Q9BUF5 446 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 VPS4AQ9UN37 437 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 PAXBP1Q9Y5B6 917 aa5.02□□□□□ -1.61
SMC4-223ENST00000493695 SLC22A23A1A5C7 686 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 AGPSO00116 658 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 RRHO14718 337 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 CCP110O43303 1012 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 PRAMEF2O60811 474 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 EN2P19622 333 aaPredicted RBP5.01□□□□□ -1.61
SMC4-223ENST00000493695 SUMO3P55854 103 aaPredicted RBP5.01□□□□□ -1.61
SMC4-223ENST00000493695 EIF4A1P60842 406 aaKnown RBP5.01□□□□□ -1.61
SMC4-223ENST00000493695 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.01□□□□□ -1.61
SMC4-223ENST00000493695 CHPFQ8IZ52 775 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 FBXL14Q8N1E6 418 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 B4GALNT2Q8NHY0 566 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 IL31RAQ8NI17 732 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 SUCLG2Q96I99 432 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 NTPCRQ9BSD7 190 aaKnown RBP5.01□□□□□ -1.61
SMC4-223ENST00000493695 DPH1Q9BZG8 443 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 TCF7L1Q9HCS4 588 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 CPNE7Q9UBL6 633 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 RIMKLBQ9ULI2 386 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 FZD4Q9ULV1 537 aa5.01□□□□□ -1.61
SMC4-223ENST00000493695 EME2A4GXA9 379 aaPredicted RBP5□□□□□ -1.61
SMC4-223ENST00000493695 A8MVJ9 347 aa5□□□□□ -1.61
SMC4-223ENST00000493695 F8W810 466 aa5□□□□□ -1.61
SMC4-223ENST00000493695 FOXN3O00409 490 aaPredicted RBP5□□□□□ -1.61
SMC4-223ENST00000493695 TBX3O15119 743 aa5□□□□□ -1.61
SMC4-223ENST00000493695 KLRC1P26715 233 aa5□□□□□ -1.61
SMC4-223ENST00000493695 GALNSP34059 522 aa5□□□□□ -1.61
SMC4-223ENST00000493695 VPS41P49754 854 aa5□□□□□ -1.61
SMC4-223ENST00000493695 SLC12A2P55011 1212 aa5□□□□□ -1.61
SMC4-223ENST00000493695 PTGR1Q14914 329 aa5□□□□□ -1.61
SMC4-223ENST00000493695 ANO6Q4KMQ2 910 aa5□□□□□ -1.61
SMC4-223ENST00000493695 NR2C2APQ86WQ0 139 aa5□□□□□ -1.61
SMC4-223ENST00000493695 FSTL5Q8N475 847 aaPredicted RBP5□□□□□ -1.61
SMC4-223ENST00000493695 ZBTB34Q8NCN2 500 aa5□□□□□ -1.61
SMC4-223ENST00000493695 MAML1Q92585 1016 aa5□□□□□ -1.61
SMC4-223ENST00000493695 ATP2A3Q93084 1043 aa5□□□□□ -1.61
SMC4-223ENST00000493695 MSRB1Q9NZV6 116 aa5□□□□□ -1.61
SMC4-223ENST00000493695 ITGB1BP2Q9UKP3 347 aa5□□□□□ -1.61
SMC4-223ENST00000493695 USP19O94966 1318 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 A0A1W2PPC1 479 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 CFAP69A5D8W1 941 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 MBD3L4A6NDZ8 208 aaPredicted RBP4.99□□□□□ -1.61
SMC4-223ENST00000493695 MBD3L3A6NE82 208 aaPredicted RBP4.99□□□□□ -1.61
SMC4-223ENST00000493695 SLC3A2P08195 630 aaKnown RBP4.99□□□□□ -1.61
SMC4-223ENST00000493695 TMEM225BP0DP42 221 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 ST6GAL1P15907 406 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 WDR5P61964 334 aaKnown RBP4.99□□□□□ -1.61
SMC4-223ENST00000493695 PLEKHG6Q3KR16 790 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 CAPRIN2Q6IMN6 1127 aaKnown RBP4.99□□□□□ -1.61
SMC4-223ENST00000493695 NPNTQ6UXI9 565 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 SLC44A5Q8NCS7 719 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 JPH3Q8WXH2 748 aaPredicted RBP4.99□□□□□ -1.61
SMC4-223ENST00000493695 B3GNT5Q9BYG0 378 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 RBM38Q9H0Z9 239 aaKnown RBP4.99□□□□□ -1.61
SMC4-223ENST00000493695 TMEM8AQ9HCN3 771 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 SLC27A6Q9Y2P4 619 aa4.99□□□□□ -1.61
SMC4-223ENST00000493695 AQP7P3A6NL99 342 aa4.98□□□□□ -1.61
SMC4-223ENST00000493695 TMIGD3P0DMS9 266 aaPredicted RBP4.98□□□□□ -1.61
SMC4-223ENST00000493695 PLA2G2AP14555 144 aa4.98□□□□□ -1.61
SMC4-223ENST00000493695 ACVR2AP27037 513 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms