RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 YTHDF3Q7Z739 585 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MAML1Q92585 1016 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 FAM149B1Q96BN6 582 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 CSPG4P5Q96PW8 444 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 KCTD15Q96SI1 283 aaPredicted RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 C10orf88Q9H8K7 445 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 POPDC2Q9HBU9 364 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 KRT82Q9NSB4 513 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MIOSQ9NXC5 875 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 TMEM63AO94886 807 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 CD52P31358 61 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 SLC18A1P54219 525 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 TRIM32Q13049 653 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 FASTKD3Q14CZ7 662 aaKnown RBP11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 VSTM1Q6UX27 236 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 LPPQ93052 612 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 ZNF317Q96PQ6 595 aaPredicted RBP11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 QKIQ96PU8 341 aaKnown RBP eCLIP11.21□□□□□ -0.614e-7■■■□□ 16.6
PHACTR4-204ENST00000493669 KLC2Q9H0B6 622 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 RABEP2Q9H5N1 569 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 CTNNAL1Q9UBT7 734 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 THSD7BQ9C0I4 1608 aa11.21□□□□□ -0.61
PHACTR4-204ENST00000493669 TMEM120BA0PK00 339 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 KCNN4O15554 427 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 DRD4P21917 467 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 SP3Q02447 781 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 LPIN1Q14693 890 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 CCDC38Q502W7 563 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 SLC45A4Q5BKX6 768 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 RAB41Q5JT25 222 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 MAP3K21Q5TCX8 1036 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 RNF180Q86T96 592 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 METTL23Q86XA0 190 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 CCDC13Q8IYE1 715 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 SCML4Q8N228 414 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 SMARCD1Q96GM5 515 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 CFHR5Q9BXR6 569 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 ADAM33Q9BZ11 813 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 PSMC3IPQ9P2W1 217 aaPredicted RBP11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 HEY1Q9Y5J3 304 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 USP3Q9Y6I4 520 aa11.21□□□□□ -0.62
PHACTR4-204ENST00000493669 CLUHO75153 1309 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 H3BRJ5 948 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 CLDN5O00501 218 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 GCATO75600 419 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 AP1G2O75843 785 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 GHRP10912 638 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 BRAFP15056 766 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 HOXD10P28358 340 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 GCAP28676 217 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TKTL1P51854 596 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TUSC3Q13454 348 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 ITGA7Q13683 1181 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 FNBP1LQ5T0N5 605 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 CCDC185Q8N715 623 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 C3orf58Q8NDZ4 430 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 NTAN1Q96AB6 310 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 ACBD6Q9BR61 282 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 NSRP1Q9H0G5 558 aaKnown RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 ACSS3Q9H6R3 686 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 BEST1O76090 585 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 RBL1P28749 1068 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 MAP3K7CLP57077 242 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 GEMIN4P57678 1058 aaKnown RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 DAOAP59103 153 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 GPX6P59796 221 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 DCAF6Q58WW2 860 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 GKAP1Q5VSY0 366 aaPredicted RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 OTUD1Q5VV17 481 aaPredicted RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 ARHGEF18Q6ZSZ5 1173 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TRABD2AQ86V40 505 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 MCUQ8NE86 351 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 IRGQQ8WZA9 623 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 PGAP3Q96FM1 320 aaPredicted RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 PCED1BQ96HM7 432 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 CSNK1G1Q9HCP0 422 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 DDX20Q9UHI6 824 aaKnown RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 NOD1Q9Y239 953 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 FAM169AQ9Y6X4 670 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TSC2P49815 1807 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 GOLGA8MH3BSY2 632 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 M0QZQ0 153 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 MGEA5O60502 916 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 ZNF135P52742 658 aaPredicted RBP11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 CORO7P57737 925 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 SCAPQ12770 1279 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TMED2Q15363 201 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 TIGD5Q53EQ6 642 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 PALM2Q8IXS6 379 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 CYP4X1Q8N118 509 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 FBXO36Q8NEA4 188 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 LRRC39Q96DD0 335 aa11.2□□□□□ -0.62
PHACTR4-204ENST00000493669 SGSM3Q96HU1 749 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms