RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 CCDC197Q8NCU1 140 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 KBTBD7Q8WVZ9 684 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 GIMAP1Q8WWP7 306 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 TNIP3Q96KP6 325 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 SENP8Q96LD8 212 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 TUBGCP5Q96RT8 1024 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 MRPL45Q9BRJ2 306 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 TMEM175Q9BSA9 504 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 PACSIN1Q9BY11 444 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 SNX25Q9H3E2 840 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 ACP6Q9NPH0 428 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 TRIM10Q9UDY6 481 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 CHMP2BQ9UQN3 213 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 INPP5FQ9Y2H2 1132 aa7.54□□□□□ -1.2
SMARCE1-211ENST00000493660 PATJQ8NI35 1801 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 CASTOR2A6NHX0 329 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 M0QZQ0 153 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 GABRDO14764 452 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ATP2C2O75185 946 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 BAIAP3O94812 1187 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ITGA2BP08514 1039 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TYMPP19971 482 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ENDOUP21128 410 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 NSFP46459 744 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 AFF1P51825 1210 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TCTN1Q2MV58 587 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 CNPY1Q3B7I2 92 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 MFSD5Q6N075 450 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 LCLAT1Q6UWP7 414 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 DSTYKQ6XUX3 929 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 COLGALT2Q8IYK4 626 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 SH2D3CQ8N5H7 860 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TFAP2BQ92481 460 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 GFM2Q969S9 779 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 RNF25Q96BH1 459 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 HAUS1Q96CS2 278 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 SUSD3Q96L08 255 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 CASD1Q96PB1 797 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ZIM3Q96PE6 472 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 FAM193BQ96PV7 902 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TWNKQ96RR1 684 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 HNRNPABQ99729 332 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 PPANQ9NQ55 473 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TBC1D13Q9NVG8 400 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TAS2R14Q9NYV8 317 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 UVRAGQ9P2Y5 699 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ZNF180Q9UJW8 692 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 PTPRDP23468 1912 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 COL4A6Q14031 1691 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 MACROD2A1Z1Q3 448 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 A8MXQ7 604 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 O00370 1275 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 STK10O94804 968 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 UPP2O95045 317 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 CALB1P05937 261 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 PDHA1P08559 390 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 CD19P15391 556 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 RAG1P15918 1043 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 GNL1P36915 607 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 HPCAP84074 193 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 PPIDQ08752 370 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ADRM1Q16186 407 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TMEM259Q4ZIN3 620 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 LIN9Q5TKA1 542 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 MON1BQ7L1V2 547 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 NLRC5Q86WI3 1866 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 METTL23Q86XA0 190 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 SCUBE1Q8IWY4 988 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 GSPT2Q8IYD1 628 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 MCOLN2Q8IZK6 566 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 SYCE1Q8N0S2 351 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 MMGT1Q8N4V1 131 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 MREGQ8N565 214 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 OR6B3Q8NGW1 331 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 PPP1R14CQ8TAE6 165 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 HEXIM2Q96MH2 286 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ZSWIM1Q9BR11 485 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 THAP2Q9H0W7 228 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 MKS1Q9NXB0 559 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 ADAM22Q9P0K1 906 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 KIAA1522Q9P206 1035 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 HMGXB4Q9UGU5 601 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 PCDHB8Q9UN66 801 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 TFR2Q9UP52 801 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 SSX2IPQ9Y2D8 614 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 STXBP5LQ9Y2K9 1186 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 DUSP10Q9Y6W6 482 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 KIAA1671Q9BY89 1806 aa7.53□□□□□ -1.2
SMARCE1-211ENST00000493660 DYTNA2CJ06 578 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 MAGEA13PA6NCF6 341 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 MICAL2O94851 1124 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 MOCS3O95396 460 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 AMHP03971 560 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 FGFR1P11362 822 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 CPA3P15088 417 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 MMP8P22894 467 aa7.52□□□□□ -1.21
SMARCE1-211ENST00000493660 PEX5P50542 639 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms