RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ANGEL2Q5VTE6 544 aaKnown RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 DCUN1D2Q6PH85 259 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ABRAQ8N0Z2 381 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 CCDC97Q96F63 343 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 OSBPL6Q9BZF3 934 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 TMX2-CTNND1H3BSU7 103 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 AIM2O14862 343 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 GNA15P30679 374 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 L1CAMP32004 1257 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 CDK18Q07002 472 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 USP41Q3LFD5 358 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 TEDDM1Q5T9Z0 273 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ADGRF2Q8IZF7 708 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 PKP2Q99959 881 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 CAAP1Q9H8G2 361 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 RIMS3Q9UJD0 308 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ADAM23O75077 832 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 SLC1A6P48664 564 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 SLC5A3P53794 718 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ADGRE1Q14246 886 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 DNAJC14Q6Y2X3 702 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 FASTKD5Q7L8L6 764 aaKnown RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ZNF677Q86XU0 584 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 RNF169Q8NCN4 708 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 PAIP1Q9H074 479 aaKnown RBP12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ARHGAP26Q9UNA1 814 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 RNF11Q9Y3C5 154 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 TTLL3Q9Y4R7 772 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 PCDHB4Q9Y5E5 795 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 ZHX2Q9Y6X8 837 aa12.1□□□□□ -0.47
HDAC4-210ENST00000493582 HMX2A2RU54 273 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 CBFA2T3O75081 653 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 ATP5BP06576 529 aaKnown RBP12.09□□□□□ -0.47
HDAC4-210ENST00000493582 COX4I1P13073 169 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 RPL10P27635 214 aaKnown RBP12.09□□□□□ -0.47
HDAC4-210ENST00000493582 PHKA2P46019 1235 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 CDH15P55291 814 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 ADRM1Q16186 407 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 PDCD4Q53EL6 469 aaKnown RBP12.09□□□□□ -0.47
HDAC4-210ENST00000493582 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-210ENST00000493582 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 TICAM1Q8IUC6 712 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 TEKT1Q969V4 418 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 ERLEC1Q96DZ1 483 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 WRNIP1Q96S55 665 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 ANLNQ9NQW6 1124 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 EBF1Q9UH73 591 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 GAKO14976 1311 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 FUOMA2VDF0 154 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 CSH1P0DML2 217 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 CSH2P0DML3 217 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 ZNF23P17027 643 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 PSMC3P17980 439 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 NDST2P52849 883 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 FLOT2Q14254 428 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 PHF13Q86YI8 300 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-210ENST00000493582 COX4I2Q96KJ9 171 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 RANBP9Q96S59 729 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 ZNHIT2Q9UHR6 403 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 COQ6Q9Y2Z9 468 aa12.09□□□□□ -0.47
HDAC4-210ENST00000493582 C3orf70A6NLC5 250 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 BIRC5O15392 142 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ZBTB14O43829 449 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 KLHL41O60662 606 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 UFL1O94874 794 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 GSRP00390 522 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ALDH2P05091 517 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ARRB2P32121 409 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 PKNOX1P55347 436 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 MS4A2Q01362 244 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 CEP55Q53EZ4 464 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 FAXCQ5TGI0 409 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 SIAH1Q8IUQ4 282 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ZC3H7BQ9UGR2 993 aaKnown RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 AFG3L2Q9Y4W6 797 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 ZNF536O15090 1300 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 KDM4FA0A1W2PPD8 638 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 NOP56O00567 594 aaKnown RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 CFLARO15519 480 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 EPHA3P29320 983 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 HSPA1LP34931 641 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 RARRES1P49788 294 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 THOP1P52888 689 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 EIF3EP60228 445 aaKnown RBP12.08□□□□□ -0.48
HDAC4-210ENST00000493582 CYP24A1Q07973 514 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 MBLAC2Q68D91 279 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
HDAC4-210ENST00000493582 TRMT10BQ6PF06 316 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms