RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 RASGRP1O95267 797 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 PARNO95453 639 aaKnown RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 PRLP01236 227 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 MMP1P03956 469 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 LGALS2P05162 132 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 LINC00271P0C7V0 271 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 TOP1P11387 765 aaKnown RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 UBA1P22314 1058 aaKnown RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 CD52P31358 61 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 PBX3P40426 434 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 TECP42680 631 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 SP2Q02086 613 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 RBL2Q08999 1139 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 ZNF543Q08ER8 600 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 GIMAP6Q6P9H5 292 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 DGLUCYQ7Z3D6 616 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 LILRA3Q8N6C8 439 aaPredicted RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 GLB1L3Q8NCI6 653 aaPredicted RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 SMRP1Q8NCR6 262 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 PPTC7Q8NI37 304 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 NSUN6Q8TEA1 469 aaKnown RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 HNRNPLLQ8WVV9 542 aaKnown RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 SLC9A6Q92581 669 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 RIPOR3Q96MK2 946 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 DCLRE1CQ96SD1 692 aaKnown RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 NDC1Q9BTX1 674 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 PHF7Q9BWX1 381 aaPredicted RBP4.95□□□□□ -1.62
CLIP4-212ENST00000493551 LRRCC1Q9C099 1032 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 RNPEPQ9H4A4 650 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 MLXIPQ9HAP2 919 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 AKIP1Q9NQ31 210 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 TRPM5Q9NZQ8 1165 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 R4GN57 208 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 CCDC171Q6TFL3 1326 aa4.95□□□□□ -1.62
CLIP4-212ENST00000493551 SLC12A8A0AV02 714 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 B4DLN1 442 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 C2CD4DB7Z1M9 353 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 ENPP3O14638 875 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 NCK2O43639 380 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 PI15O43692 258 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 PLA2G6O60733 806 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 RBMXL2O75526 392 aaKnown RBP4.94□□□□□ -1.62
CLIP4-212ENST00000493551 NCR1O76036 304 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 CHRNA1P02708 482 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 MYBP10242 640 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 ICAM3P32942 547 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 MRPL12P52815 198 aaKnown RBP4.94□□□□□ -1.62
CLIP4-212ENST00000493551 GABREP78334 506 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 SLC6A3Q01959 620 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 LPIN1Q14693 890 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 TMEM266Q2M3C6 531 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 QRICH1Q2TAL8 776 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 FAM214AQ32MH5 1076 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 CELF3Q5SZQ8 465 aaKnown RBP4.94□□□□□ -1.62
CLIP4-212ENST00000493551 BTNL9Q6UXG8 535 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 GDF7Q7Z4P5 450 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 HOMER1Q86YM7 354 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 ADGRF4Q8IZF3 695 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 DCLK2Q8N568 766 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 EFHBQ8N7U6 833 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 C12orf76Q8N812 135 aaPredicted RBP4.94□□□□□ -1.62
CLIP4-212ENST00000493551 ZNF366Q8N895 744 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 OR52N2Q8NGI0 321 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 SPPL3Q8TCT6 385 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 LMBR1Q8WVP7 490 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 DNAJB3Q8WWF6 145 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 ZNF669Q96BR6 464 aaPredicted RBP4.94□□□□□ -1.62
CLIP4-212ENST00000493551 C16orf70Q9BSU1 422 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 SLC29A3Q9BZD2 475 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 LMAN2LQ9H0V9 348 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 PXMP2Q9NR77 195 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 DKK2Q9UBU2 259 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 TLK1Q9UKI8 766 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 SYNPO2Q9UMS6 1093 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.94□□□□□ -1.62
CLIP4-212ENST00000493551 GINS2Q9Y248 185 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 CDY2AQ9Y6F7 541 aa4.94□□□□□ -1.62
CLIP4-212ENST00000493551 KIAA1671Q9BY89 1806 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 C5orf42Q9H799 3197 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 PIPSLA2A3N6 862 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 TBKBP1A7MCY6 615 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 C5orf67F2Z3F1 127 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 EYA4O95677 639 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 CRTAMO95727 393 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 ONECUT2O95948 504 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 RB1P06400 928 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 APOBEC3AP31941 199 aaPredicted RBP4.93□□□□□ -1.62
CLIP4-212ENST00000493551 NBL1P41271 181 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 COASYQ13057 564 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 RALGAPA2Q2PPJ7 1873 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 BEAN1Q3B7T3 259 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 SPECC1Q5M775 1068 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 RARS2Q5T160 578 aaKnown RBP4.93□□□□□ -1.62
CLIP4-212ENST00000493551 C20orf194Q5TEA3 1177 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 PLXDC1Q8IUK5 500 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 TBC1D10CQ8IV04 446 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 THNSL1Q8IYQ7 743 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
CLIP4-212ENST00000493551 TRAPPC12Q8WVT3 735 aa4.93□□□□□ -1.62
CLIP4-212ENST00000493551 PPP2R3CQ969Q6 453 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms