RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 KRT9P35527 623 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 EIF2DP41214 584 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 UBXN1Q04323 297 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 EFEMP1Q12805 493 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 GRSF1Q12849 480 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 PDCLQ13371 301 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 ANGPT1Q15389 498 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 DHCR24Q15392 516 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 SYCP1Q15431 976 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 BSPRYQ5W0U4 402 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 APTXQ7Z2E3 356 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 TMEM110Q86TL2 294 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 SLC47A2Q86VL8 602 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 MIB1Q86YT6 1006 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 BBS7Q8IWZ6 715 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 RNF139Q8WU17 664 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 CD101Q93033 1021 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 PLD4Q96BZ4 506 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 NOX5Q96PH1 765 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 ERGIC2Q96RQ1 377 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 DCLK3Q9C098 648 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 LHX5Q9H2C1 402 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 FAM207AQ9NSI2 230 aaPredicted RBP11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 SPATA6Q9NWH7 488 aaPredicted RBP11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 MARCH2Q9P0N8 246 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 NUDT5Q9UKK9 219 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 CEP83Q9Y592 693 aa11.16□□□□□ -0.62
CDC42SE1-206ENST00000492796 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 PIK3R2O00459 728 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 SCAMP3O14828 347 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 LAMTOR5O43504 91 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 STC2O76061 302 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 ADH5P11766 374 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 CYP11B1P15538 503 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 KLK7P49862 253 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 SNX16P57768 344 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 TPM4P67936 248 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 NHLH1Q02575 133 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 GAD2Q05329 585 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 PPP2R5DQ14738 602 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 IQCB1Q15051 598 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 FBXO43Q4G163 708 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 FSTL4Q6MZW2 842 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 MSANTD2Q6P1R3 559 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 RHBDF2Q6PJF5 856 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 Q6ZNB5 142 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 BEND5Q7L4P6 421 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 NEK11Q8NG66 645 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 CCDC26Q8TAB7 109 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 NDRG1Q92597 394 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 WBP2Q969T9 261 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 SPAG5Q96R06 1193 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 CYTH4Q9UIA0 394 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 FBXO4Q9UKT5 387 aa11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 HBS1LQ9Y450 684 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-206ENST00000492796 MUC6Q6W4X9 2439 aa11.15□□□□□ -0.63
CDC42SE1-206ENST00000492796 F5P12259 2224 aa11.15□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC12A8A0AV02 714 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 E5RJQ4 531 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 H0Y858 1186 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 HOXC11O43248 304 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 CDH5P33151 784 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 CHKAP35790 457 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 OPRD1P41143 372 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 GALK1P51570 392 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 CCR3P51677 355 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 JAM2P57087 298 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 MTAPQ13126 283 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 NNTQ13423 1086 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 TRIP4Q15650 581 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 GAB4Q2WGN9 574 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZSCAN23Q3MJ62 389 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 FILIP1LQ4L180 1135 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 LY6G5CQ5SRR4 150 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 PASD1Q8IV76 773 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 FMNL3Q8IVF7 1028 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 SCUBE3Q8IX30 993 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 SPEM1Q8N4L4 309 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 IPO4Q8TEX9 1081 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 CLEC4CQ8WTT0 213 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 EDEM1Q92611 657 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 ATOH1Q92858 354 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 PPP1R13BQ96KQ4 1090 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 MIS12Q9H081 205 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 PDCL3Q9H2J4 239 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 PRMT8Q9NR22 394 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 SPHK2Q9NRA0 654 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
CDC42SE1-206ENST00000492796 EPHB6O15197 1021 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms