RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 EPB41P11171 864 aaKnown RBP16.54■□□□□ 0.24
SMPD4-220ENST00000491319 TYRP14679 529 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 WASP42768 502 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 MCCD1P59942 119 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-220ENST00000491319 PREPLQ4J6C6 727 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-220ENST00000491319 EGFLAMQ63HQ2 1017 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 TOGARAM2Q6ZUX3 1019 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 ARMCX6Q7L4S7 300 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 CCDC186Q7Z3E2 898 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 SCD5Q86SK9 330 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 PGBD3Q8N328 593 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 FBXL13Q8NEE6 735 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 BHMTQ93088 406 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
SMPD4-220ENST00000491319 MARK1Q9P0L2 795 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 DNMT3LQ9UJW3 386 aa16.54■□□□□ 0.24
SMPD4-220ENST00000491319 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 C4orf47A7E2U8 309 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 STC2O76061 302 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 HOXB2P14652 356 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 PRCPP42785 496 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 RAD23BP54727 409 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 MAP7D1Q3KQU3 841 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 N4BP2L1Q5TBK1 243 aaPredicted RBP16.53■□□□□ 0.24
SMPD4-220ENST00000491319 Q6ZNB5 142 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 TRMT11Q7Z4G4 463 aaKnown RBP16.53■□□□□ 0.24
SMPD4-220ENST00000491319 TMEFF1Q8IYR6 380 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 SLC4A11Q8NBS3 891 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 KCNV2Q8TDN2 545 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 PIGKQ92643 395 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 TATDN2Q93075 761 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 ERLEC1Q96DZ1 483 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 P2RY11Q96G91 374 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 HEXIM2Q96MH2 286 aaKnown RBP16.53■□□□□ 0.24
SMPD4-220ENST00000491319 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
SMPD4-220ENST00000491319 ACOX2Q99424 681 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 CISHQ9NSE2 258 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 RAB20Q9NX57 234 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 PLK2Q9NYY3 685 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 USP3Q9Y6I4 520 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 PCDH15Q96QU1 1955 aa16.53■□□□□ 0.24
SMPD4-220ENST00000491319 ATXN2Q99700 1313 aaKnown RBP16.52■□□□□ 0.24
SMPD4-220ENST00000491319 PRRT4C9JH25 899 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 KHNYNO15037 678 aaKnown RBP16.52■□□□□ 0.24
SMPD4-220ENST00000491319 CETN3O15182 167 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 GABRG2P18507 467 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 NTSR1P30989 418 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 PTGER3P43115 390 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 PLA2G4AP47712 749 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 PSEN1P49768 467 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 CBWD6Q4V339 395 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 DCAF17Q5H9S7 520 aaPredicted RBP16.52■□□□□ 0.24
SMPD4-220ENST00000491319 CBWD3Q5JTY5 395 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 CBWD5Q5RIA9 395 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 NUDT18Q6ZVK8 323 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 LPCAT2Q7L5N7 544 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.24
SMPD4-220ENST00000491319 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 DNAI2Q9GZS0 605 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 CALCOCO1Q9P1Z2 691 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 WDR35Q9P2L0 1181 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 RASAL2Q9UJF2 1139 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
SMPD4-220ENST00000491319 KMT2BQ9UMN6 2715 aaPredicted RBP16.52■□□□□ 0.23
SMPD4-220ENST00000491319 A0A1W2PQF6 199 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 MAP3K13O43283 966 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 STX10O60499 249 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 KCNK5O95279 499 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 KLKB1P03952 638 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 RALAP11233 206 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 PMLP29590 882 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 DGKGP49619 791 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 PMS1P54277 932 aaKnown RBP16.51■□□□□ 0.23
SMPD4-220ENST00000491319 IRX4P78413 519 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 PSAPL1Q6NUJ1 521 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 TADA2BQ86TJ2 420 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 PIGZQ86VD9 579 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 CHPFQ8IZ52 775 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 ERCC4Q92889 916 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-220ENST00000491319 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 FAXDC2Q96IV6 333 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 RMND1Q9NWS8 449 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 CLIC5Q9NZA1 410 aa16.51■□□□□ 0.23
SMPD4-220ENST00000491319 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 PCNX2A6NKB5 2137 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 HMBSP08397 361 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 EFEMP1Q12805 493 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 TRIM61Q5EBN2 209 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 ZNF658Q5TYW1 1059 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-220ENST00000491319 ARHGAP17Q68EM7 881 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 KIAA1211LQ6NV74 962 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 ZC3H3Q8IXZ2 948 aaKnown RBP16.5■□□□□ 0.23
SMPD4-220ENST00000491319 ZNF276Q8N554 614 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 TTC39CQ8N584 583 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 TSG101Q99816 390 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 CD248Q9HCU0 757 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 TMEM9BQ9NQ34 198 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 TMEM74BQ9NUR3 256 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms