RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ABCA7Q8IZY2 2146 aa10.24□□□□□ -0.77
TMEM39A-210ENST00000490099 KIAA1549LQ6ZVL6 1849 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 EML5Q05BV3 1969 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 A0A1W2PQH9 124 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 PSMA7O14818 248 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 SLC30A4O14863 429 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 TM4SF5O14894 197 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 P4HA2O15460 535 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 CACNG3O60359 315 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 ADAM23O75077 832 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 EPN2O95208 641 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 KLKB1P03952 638 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 APODP05090 189 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 CISD3P0C7P0 127 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 ZNF806P0C7X5 589 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 RARGP13631 454 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 FMO5P49326 533 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 LIMK1P53667 647 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 MARSP56192 900 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 ZNF394Q53GI3 561 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 EMC10Q5UCC4 262 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 PRR23CQ6ZRP0 262 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 CEP68Q76N32 757 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 DGLUCYQ7Z3D6 616 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 TTC30AQ86WT1 665 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 SCML4Q8N228 414 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 RTKNQ9BST9 563 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 MMRN2Q9H8L6 949 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 ARHGEF4Q9NR80 690 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 WDR35Q9P2L0 1181 aa10.23□□□□□ -0.77
TMEM39A-210ENST00000490099 GON4LQ3T8J9 2241 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 SGK1O00141 431 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 O00370 1275 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 GFRA2O00451 464 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 XPO1O14980 1071 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 GADD45BO75293 160 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 STC2O76061 302 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 PENKP01210 267 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 TBXAS1P24557 533 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 COG7P83436 770 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 PREPLQ4J6C6 727 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 TRIM59Q8IWR1 403 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 FAM217AQ8IXS0 508 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 ARHGAP18Q8N392 663 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 CCDC33Q8N5R6 958 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 ALLCQ8N6M5 410 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 TSTD1Q8NFU3 115 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 NETO1Q8TDF5 533 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 KCTD13Q8WZ19 329 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 CDK5RAP1Q96SZ6 601 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 ZSWIM1Q9BR11 485 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 DEC1Q9P2X7 70 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 NAGPAQ9UK23 515 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 NUDT5Q9UKK9 219 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 USP18Q9UMW8 372 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 CNTN6Q9UQ52 1028 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 MYH10P35580 1976 aa10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 TPRP12270 2363 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-210ENST00000490099 BCLAF3A2AJT9 711 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 RNF225M0QZC1 329 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TULP2O00295 520 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 SNPHO15079 494 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 MDM4O15151 490 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TRIM24O15164 1050 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 CLSTN1O94985 981 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 KLF8O95600 359 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 ZBED1O96006 694 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 PAEPP09466 180 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 RALAP11233 206 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 VDRP11473 427 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 ZNF132P52740 706 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 YWHAEP62258 255 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 PDE4CQ08493 712 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 GOLGA8FQ08AF8 430 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 GOLGA8DPQ0D2H9 430 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 STIM1Q13586 685 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TRIP4Q15650 581 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 USP39Q53GS9 565 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 DCAF17Q5H9S7 520 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 EOGTQ5NDL2 527 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 C10orf120Q5SQS8 335 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TCERG1LQ5VWI1 586 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 BTBD8Q5XKL5 378 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 SMYD5Q6GMV2 418 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 LCLAT1Q6UWP7 414 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TADA2BQ86TJ2 420 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 C11orf74Q86VG3 221 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 NAT16Q8N8M0 369 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TERB1Q8NA31 727 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TXNDC5Q8NBS9 432 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 MDGA1Q8NFP4 955 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 SLC35F5Q8WV83 523 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 TFAP2BQ92481 460 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 JAKMIP2Q96AA8 810 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 MED15Q96RN5 788 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 NACA2Q9H009 215 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 ARRDC1-AS1Q9H2J1 176 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms