RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 MAML1Q92585 1016 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 SLC35A4Q96G79 324 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 LRIG1Q96JA1 1093 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 RADILQ96JH8 1075 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 CLPTM1LQ96KA5 538 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 MRGPRX4Q96LA9 322 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 GDF15Q99988 308 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 OLA1Q9NTK5 396 aaKnown RBP3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 ASB6Q9NWX5 421 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 MAN2B2Q9Y2E5 1009 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 TTLL3Q9Y4R7 772 aa3.59□□□□□ -1.84
DEPDC1-204ENST00000489862 ERCC6L2Q5T890 1561 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 A0A087WZ62 844 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 PRAMEF33A0A0G2JMD5 474 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 C19orf81C9J6K1 198 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 SYT5O00445 386 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 PRAMEF10O60809 474 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 SLC43A1O75387 559 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 SOAT2O75908 522 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 A1BGP04217 495 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 CD1AP06126 327 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 RARBP10826 455 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 BRAFP15056 766 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 SCP2P22307 547 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 RPS6KB1P23443 525 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 CCKBRP32239 447 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 STAT1P42224 750 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 BPIFB3P59826 476 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 MC2RQ01718 297 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 WASHC5Q12768 1159 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 FOXO1Q12778 655 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 DLGAP5Q15398 846 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 PKN2Q16513 984 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 TSTQ16762 297 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 RRAGBQ5VZM2 374 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 VWA1Q6PCB0 445 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 RTL10Q7L3V2 364 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 CLNKQ7Z7G1 428 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 TXLNBQ8N3L3 684 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 TMIEQ8NEW7 156 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 TFAP2BQ92481 460 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 LPIN2Q92539 896 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 GOLGA1Q92805 767 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 ZNF566Q969W8 418 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 ZUFSPQ96AP4 578 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 RGMAQ96B86 450 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 CDHR1Q96JP9 859 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 PACSIN1Q9BY11 444 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 IMPG2Q9BZV3 1241 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 ZNF287Q9HBT7 754 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 PNPLA8Q9NP80 782 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 HELLSQ9NRZ9 838 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 TMEM160Q9NX00 188 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 JKAMPQ9P055 326 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 MYO1AQ9UBC5 1043 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 CPA4Q9UI42 421 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 ACAD8Q9UKU7 415 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 PBRM1Q86U86 1689 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 ADAMTS12P58397 1594 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 CEP170Q5SW79 1584 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 ERICH3Q5RHP9 1530 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 CLASP1Q7Z460 1538 aa3.58□□□□□ -1.84
DEPDC1-204ENST00000489862 GRIN2AQ12879 1464 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 FHAD1B1AJZ9 1412 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 NUP160Q12769 1436 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 KIF27Q86VH2 1401 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 CARMIL1Q5VZK9 1371 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 A0A087X0M5 115 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 A0A1B0GX30 115 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 GOLGA6L3A6NEY3 463 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 SGTAO43765 313 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 DTNBO60941 627 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 RBMXL2O75526 392 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 URI1O94763 535 aaPredicted RBP3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 SUN1O94901 812 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 ARIH2O95376 493 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 SLC7A1P30825 629 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 HOXD13P35453 343 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 RPS7P62081 194 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 RPS16P62249 146 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 TLE1Q04724 770 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 ZNF844Q08AG5 666 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 NOGQ13253 232 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 CUL4BQ13620 913 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 DYRK1AQ13627 763 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 ERV3-1Q14264 604 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 PLCB4Q15147 1175 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 AKNAD1Q5T1N1 836 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 ATG9BQ674R7 924 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 KAZNQ674X7 775 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 KIAA0895LQ68EN5 471 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 GADL1Q6ZQY3 521 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 ZNF365Q70YC5 407 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 BRINP3Q76B58 766 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 FTSJ3Q8IY81 847 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 TEX11Q8IYF3 940 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 NDUFAF2Q8N183 169 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 CFAP52Q8N1V2 620 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 NAT8LQ8N9F0 302 aa3.57□□□□□ -1.84
DEPDC1-204ENST00000489862 GLIS1Q8NBF1 620 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms