RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 KCTD17Q8N5Z5 321 aa8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 NAT16Q8N8M0 369 aa8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 IFI44Q8TCB0 444 aa8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 APOBEC4Q8WW27 367 aaKnown RBP8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 RYDENQ9NUL5 291 aaKnown RBP8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 KCND3Q9UK17 655 aa8.06□□□□□ -1.12
EXOSC3-206ENST00000489414 A0A1W2PQ27 194 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 A0A1W2PQ64 194 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 A0A1W2PQC6 194 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 PRRT4C9JH25 899 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 LEFTY2O00292 366 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 LCE2BO14633 110 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 CD38P28907 300 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 SSTR2P30874 369 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 MCM4P33991 863 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 SETQ01105 290 aaPredicted RBP8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 POU5F1BQ06416 359 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 SEPT6Q14141 434 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 INPP5JQ15735 1006 aaPredicted RBP8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 PRR30Q53SZ7 412 aaPredicted RBP8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 HIST2H2BDQ6DRA6 164 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 NYAP1Q6ZVC0 841 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 CACUL1Q86Y37 369 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 FBXO39Q8N4B4 442 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 FAM174AQ8TBP5 190 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 NDRG1Q92597 394 aaKnown RBP8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 APOLD1Q96LR9 279 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 LZTS2Q9BRK4 669 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 SPZ1Q9BXG8 430 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 USP29Q9HBJ7 922 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 KIAA1468Q9P260 1216 aa8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 SEC63Q9UGP8 760 aaKnown RBP8.05□□□□□ -1.12
EXOSC3-206ENST00000489414 PRAMEF33A0A0G2JMD5 474 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 SMIM28A0A1B0GU29 152 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 C2orf78A6NCI8 922 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 M0QZQ0 153 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 TLR4O00206 839 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 SLC9A3R1O14745 358 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 HOXC11O43248 304 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 PRAMEF10O60809 474 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 HSP90AA1P07900 732 aaKnown RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 SNRPB2P08579 225 aaKnown RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 GIMD1P0DJR0 217 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 MARCKSP29966 332 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 SFNP31947 248 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 JAK3P52333 1124 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 ZNF132P52740 706 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 PPP2R2AP63151 447 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 GAD2Q05329 585 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 SSRP1Q08945 709 aaKnown RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 DMP1Q13316 513 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 LY6G5CQ5SRR4 150 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 BIVMQ86UB2 503 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 SPATS2Q86XZ4 545 aaKnown RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 NOSTRINQ8IVI9 506 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 CCDC13Q8IYE1 715 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 NUDT8Q8WV74 236 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 CRYGNQ8WXF5 182 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 EPAS1Q99814 870 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 UBAC1Q9BSL1 405 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 NFKBIZQ9BYH8 718 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 PDZD7Q9H5P4 517 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 EBF2Q9HAK2 575 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 PREBQ9HCU5 417 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 FOXJ2Q9P0K8 574 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 GDAQ9Y2T3 454 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 TIMM13Q9Y5L4 95 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 STON1Q9Y6Q2 735 aa8.04□□□□□ -1.12
EXOSC3-206ENST00000489414 ZNF891A8MT65 544 aaPredicted RBP8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 SCAMP3O14828 347 aaKnown RBP8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 WNT9AO14904 365 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 CHMP2AO43633 222 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 CBX6O95503 412 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 FOSP01100 380 aaPredicted RBP8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 HGFP14210 728 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 ITGB7P26010 798 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 HARS2P49590 506 aaKnown RBP8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 NPEPPSP55786 919 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 FOXD4Q12950 439 aaPredicted RBP8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 KCNB1Q14721 858 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 RAB11FIP2Q7L804 512 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 EXOC8Q8IYI6 725 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 STKLD1Q8NE28 680 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 CHDHQ8NE62 594 aaPredicted RBP8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 TPCN2Q8NHX9 752 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 TCP11Q8WWU5 503 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 SNX21Q969T3 373 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 RILPL2Q969X0 211 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 BTBD1Q9H0C5 482 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 CXXC4Q9H2H0 198 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 TTC41PQ6P2S7 1318 aa8.03□□□□□ -1.12
EXOSC3-206ENST00000489414 FFAR2O15552 330 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 PDGFAP04085 211 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 COX6B1P14854 86 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 LIFP15018 202 aa8.02□□□□□ -1.13
EXOSC3-206ENST00000489414 HDCP19113 662 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms