RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CA3P07451 260 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 ATF6P18850 670 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 KDELR1P24390 212 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 CDKN2BP42772 138 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 PSEN1P49768 467 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 USP46P62068 366 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 PITX1P78337 314 aaPredicted RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 UBE3AQ05086 875 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 SHHQ15465 462 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 ARL13BQ3SXY8 428 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 GLE1Q53GS7 698 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 EFHC2Q5JST6 749 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 ERMARDQ5T6L9 678 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 OTUD1Q5VV17 481 aaPredicted RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 PLPP4Q5VZY2 271 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 CYP4V2Q6ZWL3 525 aaPredicted RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 SCD5Q86SK9 330 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 TAC4Q86UU9 113 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 RFX6Q8HWS3 928 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 PSTKQ8IV42 348 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 TCEAL8Q8IYN2 117 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 TNS4Q8IZW8 715 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 PDZD8Q8NEN9 1154 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 CMASQ8NFW8 434 aaPredicted RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 RNF34Q969K3 372 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 MAGOHBQ96A72 148 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 RUNDC3BQ96NL0 473 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 SAMD11Q96NU1 681 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 C17orf80Q9BSJ5 609 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 MAK16Q9BXY0 300 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 UBE2OQ9C0C9 1292 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 SMOC2Q9H3U7 446 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 SLITRK6Q9H5Y7 841 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 ALG13Q9NP73 1137 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 TLR9Q9NR96 1032 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 TLR8Q9NR97 1041 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 HOMER3Q9NSC5 361 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 OLA1Q9NTK5 396 aaKnown RBP10.43□□□□□ -0.74
USP11-211ENST00000489111 PIGVQ9NUD9 493 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 TMEM51Q9NW97 253 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 GPATCH2LQ9NWQ4 482 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP11-211ENST00000489111 IL37Q9NZH6 218 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 PCDHA11Q9Y5I1 949 aa10.43□□□□□ -0.74
USP11-211ENST00000489111 TCRBV7S2A1N4TA0A589 114 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 FAM92AA1XBS5 289 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 TARSL2A2RTX5 802 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 C3orf70A6NLC5 250 aaPredicted RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 C5orf67F2Z3F1 127 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 LILRB3O75022 631 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 ENDOD1O94919 500 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 SEC24AO95486 1093 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 RB1P06400 928 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 CNPP09543 421 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 CSH1P0DML2 217 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 CSH2P0DML3 217 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 KRT10P13645 584 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 MYOGP15173 224 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 MCM3P25205 808 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 KLRC2P26717 231 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 CHRNA3P32297 505 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 ARL4AP40617 200 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 ATXN1P54253 815 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 EPHB3P54753 998 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 AIF1P55008 147 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 TAF10Q12962 218 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 MTMR3Q13615 1198 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 TFDP2Q14188 446 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 NAA30Q147X3 362 aaPredicted RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 ZC3H12AQ5D1E8 599 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 PPP6R3Q5H9R7 873 aaPredicted RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 FAM109BQ6ICB4 259 aaPredicted RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 CCDC149Q6ZUS6 474 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 BNIPLQ7Z465 357 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 TADA2BQ86TJ2 420 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 ITIH5Q86UX2 942 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 VSIG1Q86XK7 387 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 CCDC185Q8N715 623 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 CCDC26Q8TAB7 109 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 MICAL1Q8TDZ2 1067 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 POF1BQ8WVV4 589 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 TSC1Q92574 1164 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 NTAN1Q96AB6 310 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 PGAP3Q96FM1 320 aaPredicted RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 ZNF512Q96ME7 567 aaPredicted RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 SERPINB11Q96P15 392 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 TGS1Q96RS0 853 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 CDK5RAP1Q96SZ6 601 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 ZNF670Q9BS34 389 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 TTLL2Q9BWV7 592 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 ADAM33Q9BZ11 813 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 DDX47Q9H0S4 455 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 DHX35Q9H5Z1 703 aaKnown RBP10.42□□□□□ -0.74
USP11-211ENST00000489111 NMUR1Q9HB89 426 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 PCDH18Q9HCL0 1135 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.42□□□□□ -0.74
USP11-211ENST00000489111 CLIC5Q9NZA1 410 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 RASAL2Q9UJF2 1139 aa10.42□□□□□ -0.74
USP11-211ENST00000489111 EFR3BQ9Y2G0 817 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms