RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 ZNF180Q9UJW8 692 aa16.98■□□□□ 0.31
GCOM1-210ENST00000488175 ARHGAP42A6NI28 874 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 F5H423 210 aaPredicted RBP16.97■□□□□ 0.31
GCOM1-210ENST00000488175 SORBS2O94875 1100 aaKnown RBP16.97■□□□□ 0.31
GCOM1-210ENST00000488175 ENDOD1O94919 500 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 BPGMP07738 259 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 CXCL8P10145 99 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 ZNF143P52747 638 aaPredicted RBP16.97■□□□□ 0.31
GCOM1-210ENST00000488175 LAMTOR4Q0VGL1 99 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
GCOM1-210ENST00000488175 MFN1Q8IWA4 741 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 ADGRF2Q8IZF7 708 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 AGBL3Q8NEM8 1001 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 PPP1R14CQ8TAE6 165 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 PYDC1Q8WXC3 89 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 TRIM4Q9C037 500 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 SLC17A6Q9P2U8 582 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 SIX4Q9UIU6 781 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 AFG3L2Q9Y4W6 797 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 KIAA1217Q5T5P2 1943 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 ITM2AO43736 263 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 PRPSAP2O60256 369 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 SNNO75324 88 aaPredicted RBP16.97■□□□□ 0.31
GCOM1-210ENST00000488175 KRT38O76015 456 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 GPD2P43304 727 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 BCAR1P56945 870 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 TFDP2Q14188 446 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 RALGPS1Q5JS13 557 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 EEF1DP3Q658K8 133 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 OR6B2Q6IFH4 312 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 RAPH1Q70E73 1250 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 EEPD1Q7L9B9 569 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 STKLD1Q8NE28 680 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 HEXIM2Q96MH2 286 aaKnown RBP16.97■□□□□ 0.31
GCOM1-210ENST00000488175 TEX13BQ9BXU2 312 aa16.97■□□□□ 0.31
GCOM1-210ENST00000488175 MAFO75444 373 aaPredicted RBP16.96■□□□□ 0.31
GCOM1-210ENST00000488175 METTL18O95568 372 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 GPD1P21695 349 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 UBA1P22314 1058 aaKnown RBP16.96■□□□□ 0.31
GCOM1-210ENST00000488175 PDE1BQ01064 536 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 CDC16Q13042 620 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 CA9Q16790 459 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 DNAL1Q4LDG9 190 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 PQLC3Q8N755 202 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 USP6NLQ92738 828 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 NR2E3Q9Y5X4 410 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 WDR81Q562E7 1941 aa16.96■□□□□ 0.31
GCOM1-210ENST00000488175 A0A088AWK7 358 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.3
GCOM1-210ENST00000488175 NFICP08651 508 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 CCNFP41002 786 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 EFNA5P52803 228 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 TRIM50Q86XT4 487 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 NIM1KQ8IY84 436 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 TRAPPC9Q96Q05 1148 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 KLC2Q9H0B6 622 aa16.96■□□□□ 0.3
GCOM1-210ENST00000488175 NGRNQ9NPE2 291 aaKnown RBP16.96■□□□□ 0.3
GCOM1-210ENST00000488175 DDX43Q9NXZ2 648 aaKnown RBP16.96■□□□□ 0.3
GCOM1-210ENST00000488175 INO80B-WBP1J3KQ70 363 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 ITGB3P05106 788 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 SERPINA6P08185 405 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 RGS7P49802 495 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 RPL10AP62906 217 aaKnown RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 PPP6R3Q5H9R7 873 aaPredicted RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 RTKN2Q8IZC4 609 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 C1orf127Q8N9H9 656 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 ZNF280CQ8ND82 737 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 PCDH19Q8TAB3 1148 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 TMEM176AQ96HP8 235 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 NLRP4Q96MN2 994 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 CNPY3Q9BT09 278 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 INO80BQ9C086 356 aaPredicted RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 EBF3Q9H4W6 596 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 XAB2Q9HCS7 855 aaKnown RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 CPSF2Q9P2I0 782 aaKnown RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 DNAJC16Q9Y2G8 782 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 IGKV6D-21A0A0A0MT36 114 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 SDR42E2A6NKP2 422 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 C2CD4BA6NLJ0 364 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 CSDE1O75534 798 aaKnown RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 KCNA4P22459 653 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 CRHR1P34998 444 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 TCF7P36402 384 aaPredicted RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 CPOXP36551 454 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 EPHB1P54762 984 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 GSTA3Q16772 222 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 FASTKD1Q53R41 847 aaKnown RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 FAM183BPQ6ZVS7 135 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 HIPK4Q8NE63 616 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 ZNF778Q96MU6 729 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 BCO2Q9BYV7 579 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 MAGEB5Q9BZ81 275 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 PIH1D1Q9NWS0 290 aaKnown RBP16.95■□□□□ 0.3
GCOM1-210ENST00000488175 PDP2Q9P2J9 529 aa16.95■□□□□ 0.3
GCOM1-210ENST00000488175 APOL1O14791 398 aa16.94■□□□□ 0.3
GCOM1-210ENST00000488175 RNASEH1O60930 286 aaKnown RBP16.94■□□□□ 0.3
GCOM1-210ENST00000488175 FARP2O94887 1054 aaPredicted RBP16.94■□□□□ 0.3
GCOM1-210ENST00000488175 SURF1Q15526 300 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms