RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 RRN3Q9NYV6 651 aa14.69□□□□□ -0.06
NUP188-207ENST00000487952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.69□□□□□ -0.06
NUP188-207ENST00000487952 GDE1Q9NZC3 331 aa14.69□□□□□ -0.06
NUP188-207ENST00000487952 UVRAGQ9P2Y5 699 aa14.69□□□□□ -0.06
NUP188-207ENST00000487952 TMEM59LQ9UK28 342 aa14.69□□□□□ -0.06
NUP188-207ENST00000487952 NUDT5Q9UKK9 219 aa14.69□□□□□ -0.06
NUP188-207ENST00000487952 NAALADL1Q9UQQ1 740 aa14.69□□□□□ -0.06
NUP188-207ENST00000487952 MYO16Q9Y6X6 1858 aa14.69□□□□□ -0.06
NUP188-207ENST00000487952 GREB1Q4ZG55 1949 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 TCRBV5S1A1TA0A578 114 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 COCHO43405 550 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 CCDC175P0C221 793 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 GBP1P32455 592 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 FLT3P36888 993 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
NUP188-207ENST00000487952 SULT1E1P49888 294 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 KIF5AQ12840 1032 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 MSANTD2Q6P1R3 559 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 KLHDC10Q6PID8 442 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 MIB1Q86YT6 1006 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 CMTM8Q8IZV2 173 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.68□□□□□ -0.06
NUP188-207ENST00000487952 ZNF564Q8TBZ8 553 aaPredicted RBP14.68□□□□□ -0.06
NUP188-207ENST00000487952 DQX1Q8TE96 717 aaKnown RBP14.68□□□□□ -0.06
NUP188-207ENST00000487952 KHSRPQ92945 711 aaKnown RBP eCLIP14.68□□□□□ -0.06
NUP188-207ENST00000487952 SERPINB11Q96P15 392 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 DDX23Q9BUQ8 820 aaKnown RBP14.68□□□□□ -0.06
NUP188-207ENST00000487952 SLC46A2Q9BY10 475 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 KCNF1Q9H3M0 494 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 PRDM6Q9NQX0 595 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 MARCH2Q9P0N8 246 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 ANAPC7Q9UJX3 599 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 REXO2Q9Y3B8 237 aaKnown RBP14.68□□□□□ -0.06
NUP188-207ENST00000487952 ADGRG1Q9Y653 693 aa14.68□□□□□ -0.06
NUP188-207ENST00000487952 ZFP37Q9Y6Q3 630 aaPredicted RBP14.68□□□□□ -0.06
NUP188-207ENST00000487952 SYNJ2BP-COX16A0A087WUM0 186 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 SLC12A8A0AV02 714 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 C2CD4BA6NLJ0 364 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 NRG2O14511 850 aaPredicted RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 DPYSL4O14531 572 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 MDM4O15151 490 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 TBX18O95935 607 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 FYNP06241 537 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 RFC1P35251 1148 aaPredicted RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 NAP1L1P55209 391 aaKnown RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 TFF2Q03403 129 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 PPP1R15BQ5SWA1 713 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 SYPL2Q5VXT5 272 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 SND1Q7KZF4 910 aaKnown RBP eCLIP14.67□□□□□ -0.06
NUP188-207ENST00000487952 TAC4Q86UU9 113 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 DDX42Q86XP3 938 aaKnown RBP eCLIP14.67□□□□□ -0.06
NUP188-207ENST00000487952 TDRD5Q8NAT2 981 aaKnown RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 TTC16Q8NEE8 873 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 ZSCAN18Q8TBC5 510 aaPredicted RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 TRIM44Q96DX7 344 aaPredicted RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 MYADMQ96S97 322 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 CYP2S1Q96SQ9 504 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 PHF7Q9BWX1 381 aaPredicted RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 TSGA10Q9BZW7 698 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 SMOC2Q9H3U7 446 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 KIF9Q9HAQ2 790 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 DDIT4Q9NX09 232 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 SMPD4Q9NXE4 827 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 COX16Q9P0S2 106 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 SFMBT1Q9UHJ3 866 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 LCMT1Q9UIC8 334 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 NR2E1Q9Y466 385 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 CPQQ9Y646 472 aa14.67□□□□□ -0.06
NUP188-207ENST00000487952 ZNF638Q14966 1978 aaKnown RBP14.67□□□□□ -0.06
NUP188-207ENST00000487952 C2orf16Q68DN1 1984 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 TMEM191CA6NGB0 347 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 M0QYT0 321 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 MYO1FO00160 1098 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 OLFM2O95897 454 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 TRUB2O95900 331 aaKnown RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 F9P00740 461 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 HMBSP08397 361 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 SP100P23497 879 aaPredicted RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 PSMA2P25787 234 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 PTPN9P43378 593 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 KPNA1P52294 538 aaPredicted RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 ZNF143P52747 638 aaPredicted RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 RPL7AP62424 266 aaKnown RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 SLC7A9P82251 487 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 COG7P83436 770 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 ATP11AP98196 1134 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 DEUP1Q05D60 604 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 SMAD2Q15796 467 aaKnown RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 CDO1Q16878 200 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 SLC25A52Q3SY17 297 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 ARID3BQ8IVW6 561 aaPredicted RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 SLC35G2Q8TBE7 412 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 ADAM32Q8TC27 787 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 SMARCD2Q92925 531 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 RNF34Q969K3 372 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 CFAP57Q96MR6 1250 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 SLC22A12Q96S37 553 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 NPY6RQ99463 290 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 CNPY3Q9BT09 278 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 RNF38Q9H0F5 515 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms