RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 ZNF485Q8NCK3 441 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 BPIFB1Q8TDL5 484 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 CHMP4CQ96CF2 233 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 MTFMTQ96DP5 389 aaKnown RBP2.74□□□□□ -1.97
USP9X-208ENST00000487625 NT5C1BQ96P26 610 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 INPP4AQ96PE3 977 aaPredicted RBP2.74□□□□□ -1.97
USP9X-208ENST00000487625 MAP3K14Q99558 947 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 C17orf80Q9BSJ5 609 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 SLC12A5Q9H2X9 1139 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 LPAR3Q9UBY5 353 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 AMFRQ9UKV5 643 aa2.74□□□□□ -1.97
USP9X-208ENST00000487625 TMEM233B4DJY2 109 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 PMPCBO75439 489 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 APEHP13798 732 aaKnown RBP2.73□□□□□ -1.97
USP9X-208ENST00000487625 GKP32189 559 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 CPA2P48052 419 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 ALDH7A1P49419 539 aaKnown RBP2.73□□□□□ -1.97
USP9X-208ENST00000487625 ARFIP2P53365 341 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 PRKAG1P54619 331 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 DLX5P56178 289 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 SATB1Q01826 763 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 LMAN2Q12907 356 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 MLC1Q15049 377 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 MGAT5BQ3V5L5 792 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 PLA1AQ53H76 456 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 INO80DQ53TQ3 878 aaPredicted RBP2.73□□□□□ -1.97
USP9X-208ENST00000487625 TRILQ7L0X0 811 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 ZBTB46Q86UZ6 589 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 SIRT6Q8N6T7 355 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 DIS3LQ8TF46 1054 aaKnown RBP2.73□□□□□ -1.97
USP9X-208ENST00000487625 RAPGEF4Q8WZA2 1011 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 RSPRY1Q96DX4 576 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 TRIM54Q9BYV2 358 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 MS4A7Q9GZW8 240 aaPredicted RBP2.73□□□□□ -1.97
USP9X-208ENST00000487625 RBM38Q9H0Z9 239 aaKnown RBP2.73□□□□□ -1.97
USP9X-208ENST00000487625 GBA2Q9HCG7 927 aaPredicted RBP2.73□□□□□ -1.97
USP9X-208ENST00000487625 DECR2Q9NUI1 292 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 COG5Q9UP83 839 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 COL4A3BPQ9Y5P4 624 aa2.73□□□□□ -1.97
USP9X-208ENST00000487625 A0A088AWK7 358 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 MYO1CO00159 1063 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 CES2O00748 559 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 MT-CO3P00414 261 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 THP07101 528 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 PF4V1P10720 104 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 XRCC6P12956 609 aaKnown RBP eCLIP2.72□□□□□ -1.97
USP9X-208ENST00000487625 DIO1P49895 249 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 COPB1P53618 953 aaKnown RBP2.72□□□□□ -1.97
USP9X-208ENST00000487625 CTBP1Q13363 440 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 STIM1Q13586 685 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 FGL2Q14314 439 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 LARS2Q15031 903 aaKnown RBP2.72□□□□□ -1.97
USP9X-208ENST00000487625 CERCAMQ5T4B2 595 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 LMBRD2Q68DH5 695 aaPredicted RBP2.72□□□□□ -1.97
USP9X-208ENST00000487625 LINC01465Q8N7H1 131 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 PPP2R3CQ969Q6 453 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 NUP88Q99567 741 aaPredicted RBP2.72□□□□□ -1.97
USP9X-208ENST00000487625 DPH1Q9BZG8 443 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 GFRA4Q9GZZ7 299 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 TCF7L1Q9HCS4 588 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 PCDH12Q9NPG4 1184 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 CNNM1Q9NRU3 951 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 PIH1D1Q9NWS0 290 aaKnown RBP2.72□□□□□ -1.97
USP9X-208ENST00000487625 GABBR1Q9UBS5 961 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 IP6K2Q9UHH9 426 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 PCDHA12Q9UN75 941 aa2.72□□□□□ -1.97
USP9X-208ENST00000487625 DRG1Q9Y295 367 aaKnown RBP2.72□□□□□ -1.97
USP9X-208ENST00000487625 IGKV6D-41A0A0C4DH26 115 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 BTN3A1O00481 513 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 ATF7P17544 494 aaPredicted RBP2.71□□□□□ -1.98
USP9X-208ENST00000487625 NCLP19338 710 aaKnown RBP2.71□□□□□ -1.98
USP9X-208ENST00000487625 TBXAS1P24557 533 aaPredicted RBP2.71□□□□□ -1.98
USP9X-208ENST00000487625 HTR1BP28222 390 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 NEK2P51955 445 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 ART1P52961 327 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 BCAT1P54687 386 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 FCN2Q15485 313 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 IFIT1BQ5T764 474 aaKnown RBP2.71□□□□□ -1.98
USP9X-208ENST00000487625 TMEM65Q6PI78 240 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 ZDHHC24Q6UX98 284 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 ZNF783Q6ZMS7 281 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 PTCHD4Q6ZW05 846 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 SRGAP1Q7Z6B7 1085 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 MORC1Q86VD1 984 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 DENND1CQ8IV53 801 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 MPP5Q8N3R9 675 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 MAFAQ8NHW3 353 aaPredicted RBP2.71□□□□□ -1.98
USP9X-208ENST00000487625 PPP1R35Q8TAP8 253 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 DNAJB14Q8TBM8 379 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 KBTBD7Q8WVZ9 684 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 MAML1Q92585 1016 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 ANKRD9Q96BM1 317 aaPredicted RBP2.71□□□□□ -1.98
USP9X-208ENST00000487625 CTHRC1Q96CG8 243 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 HOOK2Q96ED9 719 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 PHF21BQ96EK2 531 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 C1GALT1C1Q96EU7 318 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 WDYHV1Q96HA8 205 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 ZMAT3Q9HA38 289 aaKnown RBP2.71□□□□□ -1.98
USP9X-208ENST00000487625 SMURF2Q9HAU4 748 aa2.71□□□□□ -1.98
USP9X-208ENST00000487625 HOMER2Q9NSB8 354 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms