RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NAALADL1Q9UQQ1 740 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 EYSQ5T1H1 3165 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 MYO7AQ13402 2215 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 MYO16Q9Y6X6 1858 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 A0A1W2PRU2 124 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 C2orf78A6NCI8 922 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 CAPN9O14815 690 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 IRAK2O43187 625 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 COCHO43405 550 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 BUB1O43683 1085 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 BUB1BO60566 1050 aaPredicted RBP10□□□□□ -0.81
MCF2L-227ENST00000486806 PROSCO94903 275 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 ENDOD1O94919 500 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 MOCS3O95396 460 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 RALAP11233 206 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 MYL4P12829 197 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 PDGFRAP16234 1089 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 PFKLP17858 780 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 TFE3P19532 575 aaPredicted RBP10□□□□□ -0.81
MCF2L-227ENST00000486806 PSMA2P25787 234 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 SDC4P31431 198 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 RNASE9P60153 205 aaKnown RBP10□□□□□ -0.81
MCF2L-227ENST00000486806 CYP4F8P98187 520 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 ITIH3Q06033 890 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 NNTQ13423 1086 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 C15orf59Q2T9L4 293 aaPredicted RBP10□□□□□ -0.81
MCF2L-227ENST00000486806 SLC25A52Q3SY17 297 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 DCAF6Q58WW2 860 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 STXBP5Q5T5C0 1151 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 BTBD8Q5XKL5 378 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 ZSCAN30Q86W11 494 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 ARFGAP1Q8N6T3 406 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 GCNAQ96QF7 691 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 CDK5RAP1Q96SZ6 601 aaKnown RBP10□□□□□ -0.81
MCF2L-227ENST00000486806 TBCBQ99426 244 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 CNPY3Q9BT09 278 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 WDR6Q9NNW5 1121 aaKnown RBP10□□□□□ -0.81
MCF2L-227ENST00000486806 OLA1Q9NTK5 396 aaKnown RBP10□□□□□ -0.81
MCF2L-227ENST00000486806 RRN3Q9NYV6 651 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 IP6K2Q9UHH9 426 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 CDH22Q9UJ99 828 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 STAP1Q9ULZ2 295 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 GUCA1BQ9UMX6 200 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 PAXBP1Q9Y5B6 917 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 CLUHO75153 1309 aa10□□□□□ -0.81
MCF2L-227ENST00000486806 MTCL1Q9Y4B5 1905 aaKnown RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 PRRC2BQ5JSZ5 2229 aaKnown RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 SOBPA7XYQ1 873 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 MYO1FO00160 1098 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 ZNF197O14709 1029 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 MDM4O15151 490 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 LRCH4O75427 683 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 PALMO75781 387 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 TBX18O95935 607 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 IGLV3-27P01718 113 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 GJA1P17302 382 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 CEBPBP17676 345 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 DDX6P26196 483 aaKnown RBP eCLIP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 RDXP35241 583 aaKnown RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 NOP2P46087 812 aaKnown RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 SULT1E1P49888 294 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 HDAC4P56524 1084 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 PIGHQ14442 188 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 ACAP1Q15027 740 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 TEAD2Q15562 447 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 IFI16Q16666 785 aaKnown RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 RAB6CQ53S08 254 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 HECTD3Q5T447 861 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 SH3PXD2AQ5TCZ1 1133 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 TXNDC8Q6A555 127 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 POTEHQ6S545 545 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 STRADAQ7RTN6 431 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 SLFN11Q7Z7L1 901 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 TADA2BQ86TJ2 420 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 CPNE8Q86YQ8 564 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 ITFG1Q8TB96 612 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 FAM172AQ8WUF8 416 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 SUSD6Q92537 303 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 MRPS31Q92665 395 aaKnown RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 SERPINB11Q96P15 392 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 SLC22A12Q96S37 553 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 APOL5Q9BWW9 433 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 IRX2Q9BZI1 471 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-227ENST00000486806 RAB6CQ9H0N0 254 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 ATXN3LQ9H3M9 355 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 GOLPH3Q9H4A6 298 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 PIDD1Q9HB75 910 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 NUDT5Q9UKK9 219 aa9.99□□□□□ -0.81
MCF2L-227ENST00000486806 MSI1O43347 362 aaKnown RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 TRUB2O95900 331 aaKnown RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 PCK1P35558 622 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 SLC1A1P43005 524 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 ATXN1P54253 815 aaKnown RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 SLC7A9P82251 487 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 ATP11AP98196 1134 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 SLC25A11Q02978 314 aaKnown RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 MESDQ14696 234 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms