RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KLHDC10Q6PID8 442 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 HFE2Q6ZVN8 426 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 SLC26A9Q7LBE3 791 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 BHLHA9Q7RTU4 235 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 PHLDB2Q86SQ0 1253 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 MCOLN2Q8IZK6 566 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 ZNF276Q8N554 614 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 NXPE3Q969Y0 559 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 ELSPBP1Q96BH3 223 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 CHP1Q99653 195 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 BAG1Q99933 345 aaPredicted RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 KXD1Q9BQD3 176 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 SMG9Q9H0W8 520 aaKnown RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 LUC7LQ9NQ29 371 aaKnown RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 METTL5Q9NRN9 209 aaKnown RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 THG1LQ9NWX6 298 aaKnown RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 OSER1Q9NX31 292 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 SMPD4Q9NXE4 827 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 TAS2R14Q9NYV8 317 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 MARCH2Q9P0N8 246 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 IGSF9Q9P2J2 1179 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 STAP1Q9ULZ2 295 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 ARHGAP26Q9UNA1 814 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 SH3BP1Q9Y3L3 701 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 CPQQ9Y646 472 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 SCINQ9Y6U3 715 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 KIF26AQ9ULI4 1882 aaPredicted RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 MYO10Q9HD67 2058 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 ECI2O75521 394 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 PRAMEF12O95522 483 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 OLFM2O95897 454 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 IRF1P10914 325 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 KRT3P12035 628 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 ABCB4P21439 1286 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 GBP1P32455 592 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 VIPR2P41587 438 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 PGFP49763 221 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 KPNA1P52294 538 aaPredicted RBP11.9□□□□□ -0.5
NUP50-216ENST00000486184 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
NUP50-216ENST00000486184 COG7P83436 770 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 HTR4Q13639 388 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 SPA17Q15506 151 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 DCAF6Q58WW2 860 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
NUP50-216ENST00000486184 DCUN1D2Q6PH85 259 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 PARM1Q6UWI2 310 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 BEND5Q7L4P6 421 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 CCDC170Q8IYT3 715 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 DEFB106AQ8N104 65 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 C3orf20Q8ND61 904 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 BPIFB1Q8TDL5 484 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 ADAMTS19Q8TE59 1207 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 USP13Q92995 863 aaPredicted RBP11.9□□□□□ -0.5
NUP50-216ENST00000486184 PIWIL1Q96J94 861 aaKnown RBP11.9□□□□□ -0.5
NUP50-216ENST00000486184 SERPINB11Q96P15 392 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 SLC22A12Q96S37 553 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 RNF38Q9H0F5 515 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 ISCUQ9H1K1 167 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 FAM204AQ9H8W3 233 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 TRPV4Q9HBA0 871 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 MRPL47Q9HD33 250 aaKnown RBP11.9□□□□□ -0.5
NUP50-216ENST00000486184 SPTLC3Q9NUV7 552 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 PARVAQ9NVD7 372 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 OBP2AQ9NY56 170 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 RRN3Q9NYV6 651 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
NUP50-216ENST00000486184 MYO1AQ9UBC5 1043 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 CNOT8Q9UFF9 292 aaKnown RBP11.9□□□□□ -0.5
NUP50-216ENST00000486184 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 NUMBLQ9Y6R0 609 aa11.9□□□□□ -0.5
NUP50-216ENST00000486184 TICRRQ7Z2Z1 1910 aa11.9□□□□□ -0.51
NUP50-216ENST00000486184 SLC12A8A0AV02 714 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 HEPACAM2A8MVW5 462 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 LEFTY2O00292 366 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 MDM4O15151 490 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
NUP50-216ENST00000486184 TBX18O95935 607 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 HMBSP08397 361 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 PSMC3P17980 439 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 RRM1P23921 792 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 NOS2P35228 1153 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 MATKP42679 507 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 SULT1E1P49888 294 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 PTP4A2Q12974 167 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 TAF5Q15542 800 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 C10orf76Q5T2E6 689 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 TANGO2Q6ICL3 276 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 MSANTD2Q6P1R3 559 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 SND1Q7KZF4 910 aaKnown RBP eCLIP11.89□□□□□ -0.51
NUP50-216ENST00000486184 GJD3Q8N144 294 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 ST13P5Q8NFI4 369 aaPredicted RBP11.89□□□□□ -0.51
NUP50-216ENST00000486184 OLIG1Q8TAK6 271 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 SH3RF2Q8TEC5 729 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 DEPDC1BQ8WUY9 529 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 CTNNBL1Q8WYA6 563 aaPredicted RBP11.89□□□□□ -0.51
NUP50-216ENST00000486184 FGF14Q92915 247 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 RNF34Q969K3 372 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms