RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 NCOA4Q13772 614 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 CNNM4Q6P4Q7 775 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 CCNI2Q6ZMN8 369 aaPredicted RBP17.07■□□□□ 0.32
PDE6D-205ENST00000486044 ACOT1Q86TX2 421 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 C12orf56Q8IXR9 622 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 IQUBQ8NA54 791 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 CADM4Q8NFZ8 388 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 ERLEC1Q96DZ1 483 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 ZSCAN16Q9H4T2 348 aaPredicted RBP17.07■□□□□ 0.32
PDE6D-205ENST00000486044 CSNK1G1Q9HCP0 422 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 CYLDQ9NQC7 956 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 CACNA2D2Q9NY47 1150 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 GPSM3Q9Y4H4 160 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 RAD54BQ9Y620 910 aa17.07■□□□□ 0.32
PDE6D-205ENST00000486044 GREM1O60565 184 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 TBX18O95935 607 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 MAOBP27338 520 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 PLA2G4AP47712 749 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 MAP3K7CLP57077 242 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 GRIK2Q13002 908 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 STK38Q15208 465 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 E2F4Q16254 413 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 SGSM1Q2NKQ1 1148 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 KLHDC10Q6PID8 442 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 TOGARAM2Q6ZUX3 1019 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 GLRX5Q86SX6 157 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 TADA2BQ86TJ2 420 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 CRYBG2Q8N1P7 616 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 PNPLA1Q8N8W4 532 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 GOLGA5Q8TBA6 731 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 SLC2A14Q8TDB8 520 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 DNASE2BQ8WZ79 361 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 SMOQ99835 787 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 PRDM16Q9HAZ2 1276 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 TFIP11Q9UBB9 837 aaKnown RBP17.06■□□□□ 0.32
PDE6D-205ENST00000486044 DNMT3LQ9UJW3 386 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 SCML2Q9UQR0 700 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 STON1Q9Y6Q2 735 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 ADAMTS20P59510 1910 aa17.06■□□□□ 0.32
PDE6D-205ENST00000486044 CISD3P0C7P0 127 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 NCAM1P13591 858 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 CCDC130P13994 396 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 OXTRP30559 389 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
PDE6D-205ENST00000486044 C19orf48Q6RUI8 117 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 IL27RAQ6UWB1 636 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 SCARA5Q6ZMJ2 495 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 UNC13DQ70J99 1090 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 UNC93AQ86WB7 457 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 ZMIZ2Q8NF64 920 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 SETD7Q8WTS6 366 aaKnown RBP17.05■□□□□ 0.32
PDE6D-205ENST00000486044 UCMAQ8WVF2 138 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 DHX58Q96C10 678 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 TOE1Q96GM8 510 aaKnown RBP17.05■□□□□ 0.32
PDE6D-205ENST00000486044 C7orf25Q9BPX7 421 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 GZF1Q9H116 711 aaPredicted RBP17.05■□□□□ 0.32
PDE6D-205ENST00000486044 SLC6A17Q9H1V8 727 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 MAGEF1Q9HAY2 307 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 ITM2CQ9NQX7 267 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 WSB2Q9NYS7 404 aaPredicted RBP17.05■□□□□ 0.32
PDE6D-205ENST00000486044 KIAA1522Q9P206 1035 aaPredicted RBP17.05■□□□□ 0.32
PDE6D-205ENST00000486044 MYH10P35580 1976 aa17.05■□□□□ 0.32
PDE6D-205ENST00000486044 WASH3PC4AMC7 463 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 SYNCRIPO60506 623 aaKnown RBP17.04■□□□□ 0.32
PDE6D-205ENST00000486044 BEST1O76090 585 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 CER1O95813 267 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
PDE6D-205ENST00000486044 FAM200BP0CF97 657 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 ZNF883P0CG24 379 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 NASPP49321 788 aaPredicted RBP17.04■□□□□ 0.32
PDE6D-205ENST00000486044 CASP4P49662 377 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 PGFP49763 221 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 CLDN10P78369 228 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 FUT11Q495W5 492 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 PDZD3Q86UT5 571 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 TAF4BQ92750 862 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 BHMTQ93088 406 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 GPR174Q9BXC1 333 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 SDCBP2Q9H190 292 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 MIR1-1HGQ9H1L0 117 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 CD93Q9NPY3 652 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 USP36Q9P275 1121 aaKnown RBP17.04■□□□□ 0.32
PDE6D-205ENST00000486044 FBXO10Q9UK96 956 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 PCOLCE2Q9UKZ9 415 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 ZNF510Q9Y2H8 683 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 SLC27A6Q9Y2P4 619 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 PCDHA5Q9Y5H7 936 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 FREM2Q5SZK8 3169 aa17.04■□□□□ 0.32
PDE6D-205ENST00000486044 NBEAQ8NFP9 2946 aa17.03■□□□□ 0.32
PDE6D-205ENST00000486044 SPTLC2O15270 562 aa17.03■□□□□ 0.32
PDE6D-205ENST00000486044 BCAT2O15382 392 aaPredicted RBP17.03■□□□□ 0.32
PDE6D-205ENST00000486044 CBFA2T3O75081 653 aa17.03■□□□□ 0.32
PDE6D-205ENST00000486044 PPP6R2O75170 966 aa17.03■□□□□ 0.32
PDE6D-205ENST00000486044 C4BPAP04003 597 aaKnown RBP17.03■□□□□ 0.32
PDE6D-205ENST00000486044 RARGP13631 454 aa17.03■□□□□ 0.32
PDE6D-205ENST00000486044 CHKAP35790 457 aa17.03■□□□□ 0.32
PDE6D-205ENST00000486044 MATKP42679 507 aa17.03■□□□□ 0.32
PDE6D-205ENST00000486044 PSEN1P49768 467 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms