RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PLEKHA4Q9H4M7 779 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 FAM124BQ9H5Z6 455 aaPredicted RBP5.93□□□□□ -1.46
COPS3-208ENST00000486032 SFXN1Q9H9B4 322 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 CD320Q9NPF0 282 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 NDFIP2Q9NV92 336 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 TMEM30AQ9NV96 361 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 HCFC1R1Q9NWW0 138 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 AIPL1Q9NZN9 384 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 TJP2Q9UDY2 1190 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 DPP7Q9UHL4 492 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 MYO6Q9UM54 1294 aa5.93□□□□□ -1.46
COPS3-208ENST00000486032 ESPNB1AK53 854 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 GOLGA8SH3BPF8 625 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 DDX3XO00571 662 aaKnown RBP eCLIP5.92□□□□□ -1.46
COPS3-208ENST00000486032 XPO1O14980 1071 aaKnown RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 XYLBO75191 536 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 USP17L7P0C7H9 530 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 SETSIPP0DME0 302 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CSH1P0DML2 217 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CSH2P0DML3 217 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 IL9P15248 144 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 PTPN2P17706 415 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CHRNB2P17787 502 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ABCB4P21439 1286 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 GABRR2P28476 465 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 GPD2P43304 727 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 MAGEA11P43364 429 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 NSFP46459 744 aaKnown RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 TKTL1P51854 596 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CYP4F8P98187 520 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 GFPT1Q06210 699 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 ADIGQ0VDE8 80 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CLEC16AQ2KHT3 1053 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CCDC122Q5T0U0 273 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CES5AQ6NT32 575 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 PMF1Q6P1K2 205 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 SYCE2Q6PIF2 218 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 PDZD4Q76G19 769 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 DNAJB7Q7Z6W7 309 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 ITIH5Q86UX2 942 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 VPS36Q86VN1 386 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ERICH1Q86X53 443 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ZNF677Q86XU0 584 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 SIX6OS1Q8N1H7 587 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 WDTC1Q8N5D0 677 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ST13P5Q8NFI4 369 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 IPO4Q8TEX9 1081 aaKnown RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 CLEC4CQ8WTT0 213 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ING5Q8WYH8 240 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 DDX1Q92499 740 aaKnown RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 FBXO32Q969P5 355 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 FAM149B1Q96BN6 582 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 PABPC5Q96DU9 382 aaKnown RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 PPP1R13BQ96KQ4 1090 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 C8orf48Q96LL4 319 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CCDC42Q96M95 316 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ZNF830Q96NB3 372 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 NOX5Q96PH1 765 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 GCNAQ96QF7 691 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 OCSTAMPQ9BR26 566 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ULBP1Q9BZM6 244 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ATXN3LQ9H3M9 355 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 UBE2ZQ9H832 354 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 TRPC7Q9HCX4 862 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ZNF334Q9HCZ1 680 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 ABCB6Q9NP58 842 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ASAH2Q9NR71 780 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 SPTLC3Q9NUV7 552 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 DZANK1Q9NVP4 752 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ZDHHC7Q9NXF8 308 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 TAS2R14Q9NYV8 317 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CLEC1BQ9P126 229 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 ARHGAP20Q9P2F6 1191 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 IMPACTQ9P2X3 320 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 DNMT3BQ9UBC3 853 aaKnown RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 MYO1AQ9UBC5 1043 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CHORDC1Q9UHD1 332 aaPredicted RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 ADAMTS1Q9UHI8 967 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 CYTH4Q9UIA0 394 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 NOCTQ9UK39 431 aaKnown RBP5.92□□□□□ -1.46
COPS3-208ENST00000486032 GPSM3Q9Y4H4 160 aa5.92□□□□□ -1.46
COPS3-208ENST00000486032 MTCL1Q9Y4B5 1905 aaKnown RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 SOWAHDA6NJG2 315 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 HHLA1C9JL84 531 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 E5RJQ4 531 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 NCK2O43639 380 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 GRAP2O75791 330 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 RTN3O95197 1032 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 GJB6O95452 261 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 ERBB2P04626 1255 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 CYP1A1P04798 512 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 RHOP08100 348 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 YWHAQP27348 245 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 CYLC1P35663 651 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 PRKCIP41743 596 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 PLA2G4AP47712 749 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 KIF11P52732 1056 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 GSDMDP57764 484 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 RNASE9P60153 205 aaKnown RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 NOMO3P69849 1222 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms