RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 PCDHA13Q9Y5I0 950 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 SLC38A8A6NNN8 435 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
DDX56-212ENST00000485367 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 CALUO43852 315 aaPredicted RBP11.29□□□□□ -0.6
DDX56-212ENST00000485367 GFRA3O60609 400 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 PRAMEF12O95522 483 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 F11P03951 625 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 CSH1P0DML2 217 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 CSH2P0DML3 217 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 TARSP26639 723 aaKnown RBP11.29□□□□□ -0.6
DDX56-212ENST00000485367 NBL1P41271 181 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 AP3M2P53677 418 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 C6orf89Q6UWU4 347 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 TMEM150AQ86TG1 271 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 NLRP14Q86W24 1093 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 C1orf210Q8IVY1 113 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 MAB21L3Q8N8X9 362 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 PARD3BQ8TEW8 1205 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 FUBP3Q96I24 572 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX56-212ENST00000485367 ZFYVE19Q96K21 471 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 ATP6V1G3Q96LB4 118 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 LUC7LQ9NQ29 371 aaKnown RBP11.29□□□□□ -0.6
DDX56-212ENST00000485367 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 NDRG2Q9UN36 371 aaKnown RBP11.29□□□□□ -0.6
DDX56-212ENST00000485367 FRMD4BQ9Y2L6 1034 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 PIAS3Q9Y6X2 628 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 OBSL1O75147 1896 aa11.29□□□□□ -0.6
DDX56-212ENST00000485367 CHADO15335 359 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 NCAM2O15394 837 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 NOL4O94818 638 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 BDNFP23560 247 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 ATICP31939 592 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 MAGEA11P43364 429 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 KPNA1P52294 538 aaPredicted RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 DLG4P78352 724 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 FCHO2Q0JRZ9 810 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 MAPRE1Q15691 268 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 ZNF699Q32M78 642 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 MDH1BQ5I0G3 518 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 TXNDC8Q6A555 127 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 FAM3CQ92520 227 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 MRPS31Q92665 395 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 ITFG2Q969R8 447 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 NOX5Q96PH1 765 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CCT8L2Q96SF2 557 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 XYLT2Q9H1B5 865 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CAPN6Q9Y6Q1 641 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 RIF1Q5UIP0 2472 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 COL4A2P08572 1712 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 SSU72P8A0A1W2PR75 194 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 TRIM49BA6NDI0 452 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 GOLGA6L10A6NI86 522 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 SHISA7A6NL88 538 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 A8MXQ7 604 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 MYO1FO00160 1098 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 ARNTLO00327 626 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CES2O00748 559 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 FGFR1OPO95684 399 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 STAU1O95793 577 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 C4BPAP04003 597 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 FAM163BP0C2L3 166 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 DDX6P26196 483 aaKnown RBP eCLIP11.28□□□□□ -0.6
DDX56-212ENST00000485367 WEE1P30291 646 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 AVPR1AP37288 418 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 GRIK1P39086 918 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 KIF11P52732 1056 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CLDN10P78369 228 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 NCOA4Q13772 614 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 MON1AQ86VX9 555 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 FMNL3Q8IVF7 1028 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CCDC13Q8IYE1 715 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CMTM8Q8IZV2 173 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CELF5Q8N6W0 485 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 BPIFB1Q8TDL5 484 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 TMEM174Q8WUU8 243 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 NKD2Q969F2 451 aaPredicted RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 CLDN23Q96B33 292 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 PCED1BQ96HM7 432 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 CNOT6LQ96LI5 555 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 NUCKS1Q9H1E3 243 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 DPEP3Q9H4B8 488 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 THG1LQ9NWX6 298 aaKnown RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 OBP2AQ9NY56 170 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 UXTQ9UBK9 157 aaPredicted RBP11.28□□□□□ -0.6
DDX56-212ENST00000485367 ZMYM5Q9UJ78 669 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 NME7Q9Y5B8 376 aa11.28□□□□□ -0.6
DDX56-212ENST00000485367 PTPRDP23468 1912 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms