RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 HMGA1P17096 107 aaKnown RBP18.22■□□□□ 0.51
CCDC78-214ENST00000485091 PLXNA3P51805 1871 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 SEL1L2Q5TEA6 688 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 RSRC2Q7L4I2 434 aaKnown RBP18.22■□□□□ 0.51
CCDC78-214ENST00000485091 STRADAQ7RTN6 431 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 DNAJB7Q7Z6W7 309 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-214ENST00000485091 FAM131BQ86XD5 332 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 ARHGAP18Q8N392 663 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 TIFAQ96CG3 184 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 SLITRK1Q96PX8 696 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 TRIM62Q9BVG3 475 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 CARD9Q9H257 536 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 TLR8Q9NR97 1041 aaKnown RBP18.22■□□□□ 0.51
CCDC78-214ENST00000485091 GPATCH2LQ9NWQ4 482 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 DDIT4Q9NX09 232 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 SFMBT1Q9UHJ3 866 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 MAFFQ9ULX9 164 aa18.22■□□□□ 0.51
CCDC78-214ENST00000485091 PDE2AO00408 941 aaPredicted RBP18.21■□□□□ 0.51
CCDC78-214ENST00000485091 KRT7P08729 469 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 RARAP10276 462 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 RARGP13631 454 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 RDXP35241 583 aaKnown RBP18.21■□□□□ 0.51
CCDC78-214ENST00000485091 WHAMMP3Q1A5X7 153 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 CCDC149Q6ZUS6 474 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 ADGRD2Q7Z7M1 963 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 TAC4Q86UU9 113 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 DQX1Q8TE96 717 aaKnown RBP18.21■□□□□ 0.51
CCDC78-214ENST00000485091 NT5C3BQ969T7 300 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 CEP295NLQ96MC4 621 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 ZNF512Q96ME7 567 aaPredicted RBP18.21■□□□□ 0.51
CCDC78-214ENST00000485091 TTLL2Q9BWV7 592 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 PIGVQ9NUD9 493 aa18.21■□□□□ 0.51
CCDC78-214ENST00000485091 ZRANB2O95218 330 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 EPCAMP16422 314 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 PAFAH1B1P43034 410 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 LRRC38Q5VT99 294 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 PDE12Q6L8Q7 609 aaKnown RBP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 ADAT2Q7Z6V5 191 aaKnown RBP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 KATNAL2Q8IYT4 538 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 CCDC185Q8N715 623 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 SLC22A17Q8WUG5 538 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 UBE2Q2Q8WVN8 375 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 RAPGEF5Q92565 580 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 CASP10Q92851 521 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 MAN1C1Q9NR34 630 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 DDX56Q9NY93 547 aaKnown RBP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 GREB1Q4ZG55 1949 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 LRRD1A4D1F6 860 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 CES2O00748 559 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 MDM4O15151 490 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 TBX18O95935 607 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 RALAP11233 206 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 ZC3H12AQ5D1E8 599 aaKnown RBP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 PPM1LQ5SGD2 360 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 LRRN4CLQ8ND94 238 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 RNF34Q969K3 372 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 NCAPGQ9BPX3 1015 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 SNRNP25Q9BV90 132 aaKnown RBP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 TMPRSS4Q9NRS4 437 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC78-214ENST00000485091 RRN3Q9NYV6 651 aa18.2■□□□□ 0.5
CCDC78-214ENST00000485091 CCL16O15467 120 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 MSI1O43347 362 aaKnown RBP18.19■□□□□ 0.5
CCDC78-214ENST00000485091 ENDOD1O94919 500 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 FGGP02679 453 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 EFEMP1Q12805 493 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 LONRF2Q1L5Z9 754 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 CYP4V2Q6ZWL3 525 aaPredicted RBP18.19■□□□□ 0.5
CCDC78-214ENST00000485091 BEND5Q7L4P6 421 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 POLNQ7Z5Q5 900 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 ITIH5Q86UX2 942 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 KCTD6Q8NC69 237 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 MNS1Q8NEH6 495 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 EXD1Q8NHP7 514 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 PSMG2Q969U7 264 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 MAGEB5Q9BZ81 275 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 CCSER2Q9H7U1 834 aa18.19■□□□□ 0.5
CCDC78-214ENST00000485091 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCDC78-214ENST00000485091 ZNF638Q14966 1978 aaKnown RBP18.19■□□□□ 0.5
CCDC78-214ENST00000485091 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 RFPL2O75678 378 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 SLU7O95391 586 aaKnown RBP18.18■□□□□ 0.5
CCDC78-214ENST00000485091 CD48P09326 243 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 GBP1P32455 592 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 PSEN1P49768 467 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 CKAP4Q07065 602 aaKnown RBP18.18■□□□□ 0.5
CCDC78-214ENST00000485091 CA9Q16790 459 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 C10orf120Q5SQS8 335 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 MFSD7Q6UXD7 560 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 SND1Q7KZF4 910 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC78-214ENST00000485091 BNIPLQ7Z465 357 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 ANKS1BQ7Z6G8 1248 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 RCOR2Q8IZ40 523 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 HS6ST3Q8IZP7 471 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 RASGEF1CQ8N431 466 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 CEP112Q8N8E3 955 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 RBM41Q96IZ5 413 aaKnown RBP18.18■□□□□ 0.5
CCDC78-214ENST00000485091 HEMGNQ9BXL5 484 aa18.18■□□□□ 0.5
CCDC78-214ENST00000485091 DHX35Q9H5Z1 703 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms