RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 GTF3C3Q9Y5Q9 886 aa21.21■□□□□ 0.99
ACTB-212ENST00000484841 HOXB2P14652 356 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 BCKDHBP21953 392 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 YWHAEP62258 255 aaKnown RBP21.2■□□□□ 0.98
ACTB-212ENST00000484841 DAB2IPQ5VWQ8 1189 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 TCEAL6Q6IPX3 200 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 RSRC2Q7L4I2 434 aaKnown RBP21.2■□□□□ 0.98
ACTB-212ENST00000484841 CCDC186Q7Z3E2 898 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 MIB1Q86YT6 1006 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 CHPFQ8IZ52 775 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 RLN3Q8WXF3 142 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 PIGKQ92643 395 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 TCEAL3Q969E4 200 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 GSDMAQ96QA5 445 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 FAM124BQ9H5Z6 455 aaPredicted RBP21.2■□□□□ 0.98
ACTB-212ENST00000484841 OSER1Q9NX31 292 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 RASAL2Q9UJF2 1139 aa21.2■□□□□ 0.98
ACTB-212ENST00000484841 MDM4O15151 490 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 CACNG3O60359 315 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 HNRNPLP14866 589 aaKnown RBP eCLIP21.19■□□□□ 0.98
ACTB-212ENST00000484841 NTSR1P30989 418 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 P2RY2P41231 377 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 DPP6P42658 865 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 PRCPP42785 496 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 DGKGP49619 791 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 COG7P83436 770 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 FKBP3Q00688 224 aaKnown RBP21.19■□□□□ 0.98
ACTB-212ENST00000484841 STIM1Q13586 685 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 OLIG1Q8TAK6 271 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 SEMA4DQ92854 862 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 SMARCE1Q969G3 411 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 CNTNAP3BQ96NU0 1288 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 CNTNAP3Q9BZ76 1288 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 CLIC5Q9NZA1 410 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 STRIP2Q9ULQ0 834 aa21.19■□□□□ 0.98
ACTB-212ENST00000484841 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 SLC16A3O15427 465 aaKnown RBP21.18■□□□□ 0.98
ACTB-212ENST00000484841 ADAM23O75077 832 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 CHKAP35790 457 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 WASP42768 502 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 NUCB2P80303 420 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 TMEFF1Q8IYR6 380 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 ZNF276Q8N554 614 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 LSM14BQ9BX40 385 aaKnown RBP21.18■□□□□ 0.98
ACTB-212ENST00000484841 UBXN6Q9BZV1 441 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 DCLK3Q9C098 648 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 MARK1Q9P0L2 795 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 STARD13Q9Y3M8 1113 aa21.18■□□□□ 0.98
ACTB-212ENST00000484841 MYO18AQ92614 2054 aaKnown RBP21.17■□□□□ 0.98
ACTB-212ENST00000484841 ABCA7Q8IZY2 2146 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 AP5Z1O43299 807 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 HMBSP08397 361 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 RAD23BP54727 409 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 EFEMP1Q12805 493 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 ARHGAP17Q68EM7 881 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 SLC36A4Q6YBV0 504 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 ARMCX6Q7L4S7 300 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 FMR1NBQ8N0W7 255 aaPredicted RBP21.17■□□□□ 0.98
ACTB-212ENST00000484841 SLC4A11Q8NBS3 891 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 BHMTQ93088 406 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 NUSAP1Q9BXS6 441 aaKnown RBP21.17■□□□□ 0.98
ACTB-212ENST00000484841 TMEM9BQ9NQ34 198 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 HESX1Q9UBX0 185 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 ARMCX3Q9UH62 379 aaPredicted RBP21.17■□□□□ 0.98
ACTB-212ENST00000484841 USP3Q9Y6I4 520 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 CEP192Q8TEP8 1941 aa21.17■□□□□ 0.98
ACTB-212ENST00000484841 PLXND1Q9Y4D7 1925 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 C4orf47A7E2U8 309 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 TRIM24O15164 1050 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 GREM1O60565 184 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 STC2O76061 302 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 CYBBP04839 570 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 LRRC63Q05C16 580 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 LMAN2Q12907 356 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 SPDYCQ5MJ68 293 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 LYSMD4Q5XG99 296 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 ANKRD40Q6AI12 368 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 SCD5Q86SK9 330 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 PIGZQ86VD9 579 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 ANKRD52Q8NB46 1076 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 TATDN2Q93075 761 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 LRRC4Q9HBW1 653 aa21.16■□□□□ 0.98
ACTB-212ENST00000484841 LNP1A1A4G5 178 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 PSMA7O14818 248 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 TM4SF5O14894 197 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 ZNF217O75362 1048 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 CD19P15391 556 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 MCCD1P59942 119 aaPredicted RBP21.15■□□□□ 0.98
ACTB-212ENST00000484841 YWHAGP61981 247 aaKnown RBP eCLIP21.15■□□□□ 0.981e-10■□□□□ 9.7
ACTB-212ENST00000484841 E2F5Q15329 346 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 COBLL1Q53SF7 1204 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 SGO2Q562F6 1265 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 EGFLAMQ63HQ2 1017 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 ARID3AQ99856 593 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 METTL14Q9HCE5 456 aaKnown RBP21.15■□□□□ 0.98
ACTB-212ENST00000484841 PLK2Q9NYY3 685 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 MARCH2Q9P0N8 246 aa21.15■□□□□ 0.98
ACTB-212ENST00000484841 SLC12A8A0AV02 714 aa21.14■□□□□ 0.97
ACTB-212ENST00000484841 KCNK5O95279 499 aa21.14■□□□□ 0.97
ACTB-212ENST00000484841 GABRG2P18507 467 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms