RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 FBXL13Q8NEE6 735 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 SEMA4DQ92854 862 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 BBS2Q9BXC9 721 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 CD248Q9HCU0 757 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 BCCIPQ9P287 314 aaKnown RBP eCLIP12.06□□□□□ -0.48
SCFD1-206ENST00000484733 LNP1A1A4G5 178 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 C4orf47A7E2U8 309 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 GFRA2O00451 464 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 CETN3O15182 167 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 RALAP11233 206 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 TYRP14679 529 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 CD58P19256 250 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 HOXD12P35452 270 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 TTC30AQ86WT1 665 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 ARHGAP18Q8N392 663 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 HMGB4Q8WW32 186 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 GABRG3Q99928 467 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 TMEM9BQ9NQ34 198 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 DNAJC17Q9NVM6 304 aaKnown RBP12.06□□□□□ -0.48
SCFD1-206ENST00000484733 RMND1Q9NWS8 449 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 RAB20Q9NX57 234 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 ANGPTL2Q9UKU9 493 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 NEDD8-MDP1E9PL57 170 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 CDX4O14627 284 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-206ENST00000484733 MAP3K13O43283 966 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 STC2O76061 302 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 EPB41P11171 864 aaKnown RBP12.05□□□□□ -0.48
SCFD1-206ENST00000484733 GABRG2P18507 467 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 CSRP1P21291 193 aaKnown RBP12.05□□□□□ -0.48
SCFD1-206ENST00000484733 MXI1P50539 228 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 RAB41Q5JT25 222 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 C10orf120Q5SQS8 335 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 SDE2Q6IQ49 451 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 SYT12Q8IV01 421 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 SLC4A11Q8NBS3 891 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 RLN3Q8WXF3 142 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 TMEM176AQ96HP8 235 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 HEXIM2Q96MH2 286 aaKnown RBP12.05□□□□□ -0.48
SCFD1-206ENST00000484733 GTPBP4Q9BZE4 634 aaKnown RBP12.05□□□□□ -0.48
SCFD1-206ENST00000484733 DCLK3Q9C098 648 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 NAGPAQ9UK23 515 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 COQ4Q9Y3A0 265 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 ABCA7Q8IZY2 2146 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 NCOR2Q9Y618 2525 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 A0A1W2PQF6 199 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 SLC16A3O15427 465 aaKnown RBP12.05□□□□□ -0.48
SCFD1-206ENST00000484733 RAD23BP54727 409 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 COG7P83436 770 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 LMAN2Q12907 356 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 PIGKQ92643 395 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 MMRN2Q9H8L6 949 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 CISHQ9NSE2 258 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 SLC27A6Q9Y2P4 619 aa12.05□□□□□ -0.48
SCFD1-206ENST00000484733 MDM4O15151 490 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 TRIM24O15164 1050 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 ZNF217O75362 1048 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 PENKP01210 267 aaPredicted RBP12.04□□□□□ -0.48
SCFD1-206ENST00000484733 HOXB2P14652 356 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 DGKGP49619 791 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 IRX4P78413 519 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 EGFLAMQ63HQ2 1017 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 SLC23A3Q6PIS1 610 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 MIB1Q86YT6 1006 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 FMR1NBQ8N0W7 255 aaPredicted RBP12.04□□□□□ -0.48
SCFD1-206ENST00000484733 PGBD3Q8N328 593 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 ANKRD52Q8NB46 1076 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 JAKMIP2Q96AA8 810 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 NUSAP1Q9BXS6 441 aaKnown RBP12.04□□□□□ -0.48
SCFD1-206ENST00000484733 ZDHHC4Q9NPG8 344 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 PILRBQ9UKJ0 227 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 PATE3B3GLJ2 98 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 PRRT4C9JH25 899 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 NPC1O15118 1278 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 AP5Z1O43299 807 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 CHKAP35790 457 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 E2F5Q15329 346 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
SCFD1-206ENST00000484733 LYSMD4Q5XG99 296 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 PM20D1Q6GTS8 502 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 TPGS1Q6ZTW0 290 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 TMEFF1Q8IYR6 380 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 CPXM2Q8N436 756 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 CEP76Q8TAP6 659 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 IPO4Q8TEX9 1081 aaKnown RBP12.04□□□□□ -0.48
SCFD1-206ENST00000484733 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
SCFD1-206ENST00000484733 ZBTB24O43167 697 aaPredicted RBP12.03□□□□□ -0.48
SCFD1-206ENST00000484733 KLKB1P03952 638 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 PRCPP42785 496 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 ZNF132P52740 706 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 ZNF394Q53GI3 561 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 FYB2Q5VWT5 728 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 TOGARAM2Q6ZUX3 1019 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 METTL3Q86U44 580 aaKnown RBP12.03□□□□□ -0.48
SCFD1-206ENST00000484733 FRMD1Q8N878 549 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 SPATA20Q8TB22 786 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 TATDN2Q93075 761 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 TSG101Q99816 390 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms