RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 WDTC1Q8N5D0 677 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 EXOC4Q96A65 974 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 LMAN1LQ9HAT1 526 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 MARCH2Q9P0N8 246 aa18.86■□□□□ 0.61
HDAC6-225ENST00000483506 LSM7Q9UK45 103 aaKnown RBP18.86■□□□□ 0.61
HDAC6-225ENST00000483506 SCAMP3O14828 347 aaKnown RBP18.85■□□□□ 0.61
HDAC6-225ENST00000483506 EPHB6O15197 1021 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 SART1O43290 800 aaKnown RBP18.85■□□□□ 0.61
HDAC6-225ENST00000483506 STC2O76061 302 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 CAVIN2O95810 425 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 ADH1CP00326 375 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 IRF1P10914 325 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 CYP11B1P15538 503 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 EIF2DP41214 584 aaKnown RBP18.85■□□□□ 0.61
HDAC6-225ENST00000483506 NHLH1Q02575 133 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 UBXN1Q04323 297 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 EFEMP1Q12805 493 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 PDCLQ13371 301 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 ANGPT1Q15389 498 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 SYCP1Q15431 976 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 FSTL4Q6MZW2 842 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 RHBDF2Q6PJF5 856 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 RSRC2Q7L4I2 434 aaKnown RBP18.85■□□□□ 0.61
HDAC6-225ENST00000483506 BEND5Q7L4P6 421 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 MIB1Q86YT6 1006 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 P2RY13Q9BPV8 354 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 RASAL2Q9UJF2 1139 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 STRIP2Q9ULQ0 834 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 KIAA1549LQ6ZVL6 1849 aa18.85■□□□□ 0.61
HDAC6-225ENST00000483506 HOXC11O43248 304 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-225ENST00000483506 LTFP02788 710 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 DRD1P21728 446 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 CDH5P33151 784 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-225ENST00000483506 OPRD1P41143 372 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 GALK1P51570 392 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 GRSF1Q12849 480 aaKnown RBP eCLIP18.84■□□□□ 0.61
HDAC6-225ENST00000483506 ZSCAN23Q3MJ62 389 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 MAML2Q8IZL2 1156 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-225ENST00000483506 CLEC4CQ8WTT0 213 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 DDX1Q92499 740 aaKnown RBP18.84■□□□□ 0.61
HDAC6-225ENST00000483506 CD101Q93033 1021 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 PRMT8Q9NR22 394 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-225ENST00000483506 ST7Q9NRC1 585 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 FAM207AQ9NSI2 230 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-225ENST00000483506 ZNF510Q9Y2H8 683 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 MYOFQ9NZM1 2061 aa18.84■□□□□ 0.61
HDAC6-225ENST00000483506 E5RJQ4 531 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 PIK3R2O00459 728 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 PAPSS1O43252 624 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 KLKB1P03952 638 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 ADH5P11766 374 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 KRT9P35527 623 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 POLR2FP61218 127 aaKnown RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 MTAPQ13126 283 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 GAS6Q14393 721 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 TRIP4Q15650 581 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 LY6G5CQ5SRR4 150 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 NAIF1Q69YI7 327 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 SCUBE3Q8IX30 993 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 EDEM1Q92611 657 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 PLD4Q96BZ4 506 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 DCLK3Q9C098 648 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 FBRSL1Q9HCM7 1045 aaKnown RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 RTN4Q9NQC3 1192 aaKnown RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 SPHK2Q9NRA0 654 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 SPATA6Q9NWH7 488 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 MARK1Q9P0L2 795 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 FBXO4Q9UKT5 387 aa18.83■□□□□ 0.6
HDAC6-225ENST00000483506 HBS1LQ9Y450 684 aaKnown RBP18.83■□□□□ 0.6
HDAC6-225ENST00000483506 H0Y858 1186 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 PAPSS2O95340 614 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-225ENST00000483506 FYNP06241 537 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 PLA2G5P39877 138 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 GAD2Q05329 585 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 FBXO43Q4G163 708 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 FMNL3Q8IVF7 1028 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 ETFBKMTQ8IXQ9 262 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 SPEM1Q8N4L4 309 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 EPS8L1Q8TE68 723 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 RNF139Q8WU17 664 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 GOLGA1Q92805 767 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 PPP1R13BQ96KQ4 1090 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 NOX5Q96PH1 765 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 CPXM1Q96SM3 734 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 TRIM62Q9BVG3 475 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 MIS12Q9H081 205 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 CBX8Q9HC52 389 aa18.82■□□□□ 0.6
HDAC6-225ENST00000483506 RBM12Q9NTZ6 932 aaKnown RBP18.82■□□□□ 0.6
HDAC6-225ENST00000483506 FANCMQ8IYD8 2048 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 A0A1B0GTH6 734 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 SLC12A8A0AV02 714 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 EGFP01133 1207 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 IGLV3-27P01718 113 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 SOX5P35711 763 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 ZNF528Q3MIS6 628 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 Q6ZS52 159 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 NOP9Q86U38 636 aaKnown RBP18.81■□□□□ 0.6
HDAC6-225ENST00000483506 ZNF677Q86XU0 584 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 PASD1Q8IV76 773 aa18.81■□□□□ 0.6
HDAC6-225ENST00000483506 FAM217AQ8IXS0 508 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms