RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CLEC20AQ6ZU45 233 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 TRMT11Q7Z4G4 463 aaKnown RBP14.68□□□□□ -0.06
VARS-226ENST00000483275 PIP4P1Q86T03 277 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 CACUL1Q86Y37 369 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 SPRYD3Q8NCJ5 442 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 ZCCHC14Q8WYQ9 949 aaKnown RBP14.68□□□□□ -0.06
VARS-226ENST00000483275 CAMK1GQ96NX5 476 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 KCTD10Q9H3F6 313 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 MMRN2Q9H8L6 949 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 APOBEC3GQ9HC16 384 aaKnown RBP14.68□□□□□ -0.06
VARS-226ENST00000483275 CD248Q9HCU0 757 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 TLR8Q9NR97 1041 aaKnown RBP14.68□□□□□ -0.06
VARS-226ENST00000483275 DMAC2Q9NW81 257 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 FAM13BQ9NYF5 915 aa14.68□□□□□ -0.06
VARS-226ENST00000483275 CGNQ9P2M7 1197 aaKnown RBP14.68□□□□□ -0.06
VARS-226ENST00000483275 PVALEFA0A1B0GWK0 134 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 KIF20AO95235 890 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 F13A1P00488 732 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 ASS1P00966 412 aaKnown RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 ZSCAN22P10073 491 aaPredicted RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 HOXB3P14651 431 aaPredicted RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 ACO1P21399 889 aaKnown RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 ATXN3P54252 364 aaPredicted RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 ZNF33AQ06730 810 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 NUMA1Q14980 2115 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 C10orf120Q5SQS8 335 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 PEAR1Q5VY43 1037 aaPredicted RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 KIAA1324Q6UXG2 1013 aaKnown RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 SV2AQ7L0J3 742 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 CEP57L1Q8IYX8 460 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 MINDY1Q8N5J2 469 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 TRIML1Q8N9V2 468 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 GOLGA5Q8TBA6 731 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 IPO4Q8TEX9 1081 aaKnown RBP14.67□□□□□ -0.06
VARS-226ENST00000483275 PAGE5Q96GU1 130 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 CAPN10Q9HC96 672 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 CSNK1G1Q9HCP0 422 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 SCML2Q9UQR0 700 aa14.67□□□□□ -0.06
VARS-226ENST00000483275 CKAP5Q14008 2032 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 HMBSP08397 361 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 RARGP13631 454 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 P4HA1P13674 534 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 MAOBP27338 520 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 GCLMP48507 274 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 DGKGP49619 791 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 DNM1Q05193 864 aaKnown RBP14.66□□□□□ -0.06
VARS-226ENST00000483275 GFPT1Q06210 699 aaPredicted RBP14.66□□□□□ -0.06
VARS-226ENST00000483275 SEMA3BQ13214 749 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 BYSLQ13895 437 aaKnown RBP14.66□□□□□ -0.06
VARS-226ENST00000483275 DUOXA1Q1HG43 343 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 HTR3DQ70Z44 454 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 CRYBG2Q8N1P7 616 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 TAS1R2Q8TE23 839 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 FBXO44Q9H4M3 255 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 SLC32A1Q9H598 525 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 CYLDQ9NQC7 956 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 NAGPAQ9UK23 515 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 SLC6A14Q9UN76 642 aa14.66□□□□□ -0.06
VARS-226ENST00000483275 A0A1B0GVL5 298 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 SRRM3A6NNA2 597 aaPredicted RBP14.65□□□□□ -0.06
VARS-226ENST00000483275 STC2O76061 302 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 SERPINF2P08697 491 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 SLFN14P0C7P3 912 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 ATP5C1P36542 298 aaKnown RBP14.65□□□□□ -0.06
VARS-226ENST00000483275 AP3M2P53677 418 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 PPP3CAQ08209 521 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 SGSM1Q2NKQ1 1148 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 Q6ZNB5 142 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 SCD5Q86SK9 330 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 HDDC3Q8N4P3 179 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 CHCHD4Q8N4Q1 142 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 KDF1Q8NAX2 398 aaPredicted RBP14.65□□□□□ -0.06
VARS-226ENST00000483275 MRGPRX1Q96LB2 322 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 XPO6Q96QU8 1125 aaKnown RBP14.65□□□□□ -0.06
VARS-226ENST00000483275 GABRG3Q99928 467 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.65□□□□□ -0.06
VARS-226ENST00000483275 COMMD8Q9NX08 183 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 LSM7Q9UK45 103 aaKnown RBP14.65□□□□□ -0.06
VARS-226ENST00000483275 MAPK8IP1Q9UQF2 711 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 TP53BP1Q12888 1972 aaPredicted RBP14.65□□□□□ -0.06
VARS-226ENST00000483275 LAMA5O15230 3695 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 TMEM131Q92545 1883 aa14.65□□□□□ -0.06
VARS-226ENST00000483275 KNL1Q8NG31 2342 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 OPHN1O60890 802 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 KLKB1P03952 638 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 CISD3P0C7P0 127 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 PDIA4P13667 645 aaKnown RBP14.64□□□□□ -0.07
VARS-226ENST00000483275 CD59P13987 128 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 PFKFB1P16118 471 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 INCA1Q0VD86 236 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 GEN1Q17RS7 908 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 PLEKHG6Q3KR16 790 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 ZNF394Q53GI3 561 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 SPDYCQ5MJ68 293 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 SLC36A4Q6YBV0 504 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 NUDT18Q6ZVK8 323 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 UNC93AQ86WB7 457 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 SLC9A9Q8IVB4 645 aa14.64□□□□□ -0.07
VARS-226ENST00000483275 RGL4Q8IZJ4 473 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms