RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 HFE2Q6ZVN8 426 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 DDX42Q86XP3 938 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCM2-215ENST00000482714 RHOT2Q8IXI1 618 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 DEFB106AQ8N104 65 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 FEZF2Q8TBJ5 459 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 SMARCD2Q92925 531 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 ZNF653Q96CK0 615 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 PGAP3Q96FM1 320 aaPredicted RBP16.03■□□□□ 0.16
CCM2-215ENST00000482714 NACA2Q9H009 215 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 RNF38Q9H0F5 515 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 THAP2Q9H0W7 228 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 KIF9Q9HAQ2 790 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 ARHGAP26Q9UNA1 814 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 TMEM191CA6NGB0 347 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 GOLGA8SH3BPF8 625 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 COCHO43405 550 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 DAB1O75553 588 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 CEBPBP17676 345 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 ABCB4P21439 1286 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
CCM2-215ENST00000482714 PGFP49763 221 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 CYP4F8P98187 520 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 ACAP1Q15027 740 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 TAF5Q15542 800 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 SLC25A52Q3SY17 297 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 DCAF6Q58WW2 860 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 C10orf120Q5SQS8 335 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 MTSS1LQ765P7 747 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 GET4Q7L5D6 327 aaPredicted RBP16.03■□□□□ 0.16
CCM2-215ENST00000482714 ZDHHC14Q8IZN3 488 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 CELF5Q8N6W0 485 aaKnown RBP16.03■□□□□ 0.16
CCM2-215ENST00000482714 ASB16Q96NS5 453 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 SLITRK6Q9H5Y7 841 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 TDP1Q9NUW8 608 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 NAALADL1Q9UQQ1 740 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 HBS1LQ9Y450 684 aaKnown RBP16.03■□□□□ 0.16
CCM2-215ENST00000482714 C2orf16Q68DN1 1984 aa16.02■□□□□ 0.16
CCM2-215ENST00000482714 A0A0A6YYK5 440 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 C2orf78A6NCI8 922 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 C2CD4BA6NLJ0 364 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 ENDOD1O94919 500 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 CKMP06732 381 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 PDGFRAP16234 1089 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 RFC1P35251 1148 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 PTPN9P43378 593 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 CCZ1BP86790 482 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 RING1Q06587 406 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 EIF4EBP2Q13542 120 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 ARID3BQ8IVW6 561 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.02■□□□□ 0.15
CCM2-215ENST00000482714 ARL14EPQ8N8R7 260 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 ZSCAN18Q8TBC5 510 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 EDEM1Q92611 657 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 PIWIL1Q96J94 861 aaKnown RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 SERPINB11Q96P15 392 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 MYADMQ96S97 322 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 CYP2S1Q96SQ9 504 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 NPY6RQ99463 290 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 KLF16Q9BXK1 252 aaPredicted RBP16.02■□□□□ 0.15
CCM2-215ENST00000482714 SMOC2Q9H3U7 446 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 CCSER2Q9H7U1 834 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 ZFP14Q9HCL3 533 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 TRPC7Q9HCX4 862 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 MARCH2Q9P0N8 246 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 PAXBP1Q9Y5B6 917 aa16.02■□□□□ 0.15
CCM2-215ENST00000482714 BTNL10A8MVZ5 291 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 PJA2O43164 708 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 TBX18O95935 607 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 SLC2A3P11169 496 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 MBL2P11226 248 aaPredicted RBP16.01■□□□□ 0.15
CCM2-215ENST00000482714 SDC4P31431 198 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 ZNF143P52747 638 aaPredicted RBP16.01■□□□□ 0.15
CCM2-215ENST00000482714 HADHBP55084 474 aaKnown RBP16.01■□□□□ 0.15
CCM2-215ENST00000482714 MTF1Q14872 753 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 SYPL2Q5VXT5 272 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 STRADAQ7RTN6 431 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 TDRD5Q8NAT2 981 aaKnown RBP16.01■□□□□ 0.15
CCM2-215ENST00000482714 UBE2Q2Q8WVN8 375 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 RXFP2Q8WXD0 754 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 CENPIQ92674 756 aaPredicted RBP16.01■□□□□ 0.15
CCM2-215ENST00000482714 AZIN2Q96A70 460 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 ZSWIM3Q96MP5 696 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 CNPY3Q9BT09 278 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 DCLK3Q9C098 648 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 METTL5Q9NRN9 209 aaKnown RBP16.01■□□□□ 0.15
CCM2-215ENST00000482714 IGSF9Q9P2J2 1179 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 MYO1AQ9UBC5 1043 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 CDH22Q9UJ99 828 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 ZNF510Q9Y2H8 683 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 TTC28Q96AY4 2481 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 DENND4CQ5VZ89 1909 aa16.01■□□□□ 0.15
CCM2-215ENST00000482714 ANAPC1Q9H1A4 1944 aa16■□□□□ 0.15
CCM2-215ENST00000482714 XIRP2A4UGR9 3374 aa16■□□□□ 0.15
CCM2-215ENST00000482714 MYO1FO00160 1098 aa16■□□□□ 0.15
CCM2-215ENST00000482714 DPYSL4O14531 572 aa16■□□□□ 0.15
CCM2-215ENST00000482714 ECI2O75521 394 aa16■□□□□ 0.15
CCM2-215ENST00000482714 GRAP2O75791 330 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms