RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 GRAMD4Q6IC98 578 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 Q6ZNB5 142 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 TMEM25Q86YD3 366 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 ZNF513Q8N8E2 541 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 ANKRD52Q8NB46 1076 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 SLC4A11Q8NBS3 891 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 SEMA4DQ92854 862 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 DHTKD1Q96HY7 919 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 HEXIM2Q96MH2 286 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 CEP63Q96MT8 703 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 BBS2Q9BXC9 721 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 DCLK3Q9C098 648 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 POLR3BQ9NW08 1133 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 OSER1Q9NX31 292 aa12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-207ENST00000481335 DCDC2BA2VCK2 349 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 NEDD8-MDP1E9PL57 170 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 SGK1O00141 431 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 SCAMP3O14828 347 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 NPC1O15118 1278 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CAVIN2O95810 425 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 TBX18O95935 607 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 ADRB1P08588 477 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 TYRP14679 529 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 HOXD12P35452 270 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 PGFP49763 221 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 ZNF132P52740 706 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 BCAT1P54687 386 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CREB5Q02930 508 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 MESP2Q0VG99 397 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CETN1Q12798 172 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CUL2Q13617 745 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CBWD6Q4V339 395 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 ZNF394Q53GI3 561 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CBWD3Q5JTY5 395 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CBWD5Q5RIA9 395 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 C10orf76Q5T2E6 689 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 SCML4Q8N228 414 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 CCDC33Q8N5R6 958 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 SLC35C1Q96A29 364 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 TPSD1Q9BZJ3 242 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 OLA1Q9NTK5 396 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 DNAJC17Q9NVM6 304 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 KIAA1257Q9ULG3 409 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 STRIP2Q9ULQ0 834 aa12.75□□□□□ -0.37
SQSTM1-207ENST00000481335 GFRA2O00451 464 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 P4HA2O15460 535 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 GDF9O60383 454 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 ADAM23O75077 832 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 STC2O76061 302 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 NTSR1P30989 418 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 ZNF445P59923 1031 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 BST2Q10589 180 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 SF3A2Q15428 464 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 SGO2Q562F6 1265 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 PPM1JQ5JR12 505 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 STPG1Q5TH74 334 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 ANKRD40Q6AI12 368 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 PM20D1Q6GTS8 502 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 SDE2Q6IQ49 451 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 LPCAT2Q7L5N7 544 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 CYP2U1Q7Z449 544 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 SCD5Q86SK9 330 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 PIGZQ86VD9 579 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 CPXM2Q8N436 756 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 JAKMIP2Q96AA8 810 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 ARID3AQ99856 593 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 BCCIPQ9P287 314 aaKnown RBP eCLIP12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 EVLQ9UI08 416 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 FBXO10Q9UK96 956 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 SLC27A6Q9Y2P4 619 aa12.74□□□□□ -0.37
SQSTM1-207ENST00000481335 GON4LQ3T8J9 2241 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 CKAP5Q14008 2032 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 TCRBV21S2A2A0A5A6 115 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 BICDL2A1A5D9 508 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 TM4SF5O14894 197 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 DCLK1O15075 740 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 ZNF217O75362 1048 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 PENKP01210 267 aaPredicted RBP12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 PAEPP09466 180 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 VDRP11473 427 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 HOXB2P14652 356 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 HNRNPLP14866 589 aaKnown RBP eCLIP12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 DGKGP49619 791 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 PMS1P54277 932 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 STILQ15468 1287 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 RNF43Q68DV7 783 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 SLC36A4Q6YBV0 504 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 RABEPKQ7Z6M1 372 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 SFTPA1Q8IWL2 248 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 NAT16Q8N8M0 369 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 WBP2Q969T9 261 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 PLD4Q96BZ4 506 aa12.73□□□□□ -0.37
SQSTM1-207ENST00000481335 EEF2KMTQ96G04 330 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms