RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PIN4Q9Y237 131 aaKnown RBP8.56□□□□□ -1.04
LSM5-210ENST00000480956 STARD13Q9Y3M8 1113 aa8.56□□□□□ -1.04
LSM5-210ENST00000480956 A0A0A6YYJ9 748 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 A0A1W2PRV1 198 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 CCDC169A6NNP5 214 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 H0Y858 1186 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 HNRNPCL1O60812 293 aaKnown RBP8.55□□□□□ -1.04
LSM5-210ENST00000480956 SEC24DO94855 1032 aaPredicted RBP8.55□□□□□ -1.04
LSM5-210ENST00000480956 GCNT3O95395 438 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 TIAF1O95411 115 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 VIPP01282 170 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 RAB6AP20340 208 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 MAP2K3P46734 347 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 SLC11A2P49281 568 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 MXI1P50539 228 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 RPL7AP62424 266 aaKnown RBP8.55□□□□□ -1.04
LSM5-210ENST00000480956 NOMO3P69849 1222 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 SCN1BQ07699 218 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 TBL3Q12788 808 aaKnown RBP8.55□□□□□ -1.04
LSM5-210ENST00000480956 GRM4Q14833 912 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 DRICH1Q6PGQ1 229 aaPredicted RBP8.55□□□□□ -1.04
LSM5-210ENST00000480956 GIMAP7Q8NHV1 300 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 PIWIL2Q8TC59 973 aaKnown RBP8.55□□□□□ -1.04
LSM5-210ENST00000480956 DCAF11Q8TEB1 546 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 FAM216AQ8WUB2 273 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 KCNE4Q8WWG9 221 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 MR1Q95460 341 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 PIP5K1AQ99755 562 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 ST6GALNAC4Q9H4F1 302 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 ZBTB26Q9HCK0 441 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 IL1RAPL2Q9NP60 686 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 AATFQ9NY61 560 aaKnown RBP eCLIP8.55□□□□□ -1.04
LSM5-210ENST00000480956 NINJ2Q9NZG7 142 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 MYOTQ9UBF9 498 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 AURKCQ9UQB9 309 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 GDAQ9Y2T3 454 aa8.55□□□□□ -1.04
LSM5-210ENST00000480956 ACOT7O00154 380 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 IKBKBO14920 756 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 AMY1AP04745 511 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 DDCP20711 480 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 ICAM3P32942 547 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 BMPR1AP36894 532 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 HNMTP50135 292 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 CPT1AP50416 773 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 C21orf58P58505 322 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 INSM1Q01101 510 aaPredicted RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 TNK2Q07912 1038 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 PTK6Q13882 451 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 ACAP1Q15027 740 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 ERICH6BQ5W0A0 696 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 PLAG1Q6DJT9 500 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 MEX3BQ6ZN04 569 aaKnown RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 CHST9Q7L1S5 443 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 CALML6Q8TD86 181 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 VPS50Q96JG6 964 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 MED15Q96RN5 788 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 UHRF1Q96T88 793 aaPredicted RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 DBNDD2Q9BQY9 259 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 BICRAQ9NZM4 1560 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 BTBD7Q9P203 1132 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 SLC25A10Q9UBX3 287 aaPredicted RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 IL19Q9UHD0 177 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 CAPN11Q9UMQ6 739 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 NEURL1BA8MQ27 555 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 J3KTA2 159 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 OIP5O43482 229 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 PSMD10O75832 226 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 REC8O95072 547 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 ALBP02768 609 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 EIF2S1P05198 315 aaKnown RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 CD1AP06126 327 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 TPH1P17752 444 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 TYMPP19971 482 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 MCM3P25205 808 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 HOXC8P31273 242 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 MAGEA10P43363 369 aaPredicted RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 NRIP1P48552 1158 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 LIG4P49917 911 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 LUMP51884 338 aaPredicted RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 MRPL12P52815 198 aaKnown RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 MEF2AQ02078 507 aaPredicted RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 GEN1Q17RS7 908 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 NRN1LQ496H8 165 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 NHSL2Q5HYW2 709 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 MCTP1Q6DN14 999 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 ADGRG6Q86SQ4 1221 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 GMCL1P1Q8NEA9 526 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 PHOSPHO1Q8TCT1 267 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 POMGNT1Q8WZA1 660 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 TOE1Q96GM8 510 aaKnown RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 CLMNQ96JQ2 1002 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 LENG8Q96PV6 779 aaPredicted RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 AGAP2Q99490 1192 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 FAM118BQ9BPY3 351 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 TAOK3Q9H2K8 898 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 NCOR1P1Q9H4R4 102 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 STN1Q9H668 368 aaKnown RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 ACSS3Q9H6R3 686 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms