RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 OLFM2O95897 454 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 RARGP13631 454 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 HDCP19113 662 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 FECHP22830 423 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 GBP2P32456 591 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 PPP3CCP48454 512 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 YWHAGP61981 247 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 CDK17Q00537 523 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 SYPL2Q5VXT5 272 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 TRNP1Q6NT89 227 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 OLFML1Q6UWY5 402 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 MON1BQ7L1V2 547 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 OTOP3Q7RTS5 596 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 CNGA4Q8IV77 575 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 ARID3BQ8IVW6 561 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 CMTM8Q8IZV2 173 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 SIX5Q8N196 739 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 SIX6OS1Q8N1H7 587 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 ZSCAN18Q8TBC5 510 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 EDEM1Q92611 657 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 MRPS31Q92665 395 aaKnown RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 FGF14Q92915 247 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 C18orf8Q96DM3 657 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 ZFRQ96KR1 1074 aaKnown RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 ASB16Q96NS5 453 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 ISCUQ9H1K1 167 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 TLR8Q9NR97 1041 aaKnown RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 SEPT11Q9NVA2 429 aaKnown RBP12.82□□□□□ -0.36
TRA2B-212ENST00000480461 GDE1Q9NZC3 331 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 NAGPAQ9UK23 515 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 NAALADL1Q9UQQ1 740 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 PATJQ8NI35 1801 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 ANHXE9PGG2 379 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 ZNF263O14978 683 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 GRAP2O75791 330 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 FBXO21O94952 628 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 FTLP02792 175 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-212ENST00000480461 GZMAP12544 262 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 WEE1P30291 646 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 PITX1P78337 314 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-212ENST00000480461 SLC6A3Q01959 620 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 GFPT1Q06210 699 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-212ENST00000480461 TDGQ13569 410 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 TDRD12Q587J7 1177 aaKnown RBP12.81□□□□□ -0.36
TRA2B-212ENST00000480461 HECTD3Q5T447 861 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 OR6B2Q6IFH4 312 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 TMEM139Q8IV31 216 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 FMNL3Q8IVF7 1028 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 MCOLN2Q8IZK6 566 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 ZNF276Q8N554 614 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 PDZD8Q8NEN9 1154 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 IRGQQ8WZA9 623 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 PANX2Q96RD6 677 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 C11orf70Q9BRQ4 267 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 NHEJ1Q9H9Q4 299 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-212ENST00000480461 TRPV4Q9HBA0 871 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 TRPC7Q9HCX4 862 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 CLIC5Q9NZA1 410 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 ADAM22Q9P0K1 906 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 IMPACTQ9P2X3 320 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 TMEM59LQ9UK28 342 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 FBXL21Q9UKT6 434 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 CEP83Q9Y592 693 aa12.81□□□□□ -0.36
TRA2B-212ENST00000480461 MYH10P35580 1976 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 ZNF638Q14966 1978 aaKnown RBP12.8□□□□□ -0.36
TRA2B-212ENST00000480461 SSU72P8A0A1W2PR75 194 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 TLR5O60602 858 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 RTN2O75298 545 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 LTFP02788 710 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 TPM1P09493 284 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 TFE3P19532 575 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-212ENST00000480461 YWHAZP63104 245 aaKnown RBP12.8□□□□□ -0.36
TRA2B-212ENST00000480461 HTR4Q13639 388 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 ZNF268Q14587 947 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-212ENST00000480461 MTF1Q14872 753 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 ARHGAP15Q53QZ3 475 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 SMARCD2Q92925 531 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 ACSF2Q96CM8 615 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-212ENST00000480461 NOX5Q96PH1 765 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 HINFPQ9BQA5 517 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRA2B-212ENST00000480461 KLF16Q9BXK1 252 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-212ENST00000480461 SPTLC3Q9NUV7 552 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 CALCOCO1Q9P1Z2 691 aa12.8□□□□□ -0.36
TRA2B-212ENST00000480461 DOCK8Q8NF50 2099 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 GOLGA8SH3BPF8 625 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 NARSO43776 548 aaKnown RBP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 GREM1O60565 184 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 RRM1P23921 792 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 DDX6P26196 483 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 NSFP46459 744 aaKnown RBP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 PSEN1P49768 467 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 TUBP50607 506 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms