RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TSPY1Q01534 308 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 SIGLEC14Q08ET2 396 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 INCA1Q0VD86 236 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 BFSP1Q12934 665 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ADAM9Q13443 819 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 MORC3Q14149 939 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 INPP5AQ14642 412 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 SOWAHAQ2M3V2 549 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 PPM1LQ5SGD2 360 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 SNX30Q5VWJ9 437 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 IQCEQ6IPM2 695 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 LRFN4Q6PJG9 635 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 DSTYKQ6XUX3 929 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 C4orf50Q6ZRC1 276 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 RBM43Q6ZSC3 357 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 FRMD5Q7Z6J6 570 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 UBE3DQ7Z6J8 389 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 FILIP1Q7Z7B0 1213 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 CRYBG2Q8N1P7 616 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ELMOD1Q8N336 334 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 PDCL2Q8N4E4 241 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ZNF276Q8N554 614 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 CSGALNACT2Q8N6G5 542 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 MLKLQ8NB16 471 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 MYCBPAPQ8TBZ2 947 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 OVCA2Q8WZ82 227 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 SMG7Q92540 1137 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 PLPPR2Q96GM1 343 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 HPDLQ96IR7 371 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 TNIP3Q96KP6 325 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 FAM81BQ96LP2 452 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 RTP3Q9BQQ7 232 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 IER2Q9BTL4 223 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 TTLL2Q9BWV7 592 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 LRRC3Q9BY71 257 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 UBXN6Q9BZV1 441 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 MTMR12Q9C0I1 747 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 IRF2BPLQ9H1B7 796 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 BLZF1Q9H2G9 400 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 POMKQ9H5K3 350 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 TMEM8AQ9HCN3 771 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 PDE11AQ9HCR9 933 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 IL37Q9NZH6 218 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 UXTQ9UBK9 157 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 WNT16Q9UBV4 365 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 CDH9Q9ULB4 789 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 DUSP12Q9UNI6 340 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 AGAP1Q9UPQ3 857 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 DAAM1Q9Y4D1 1078 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 INSL5Q9Y5Q6 135 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 COL4A4P53420 1690 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 FNDC1Q4ZHG4 1894 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 PRAMEF27A3QJZ7 478 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 MTMR11A4FU01 709 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 C2CD4DB7Z1M9 353 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ADAM12O43184 909 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 N4BP1O75113 896 aaKnown RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 LEFTY1O75610 366 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 RFPL2O75678 378 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 NOL4O94818 638 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 LRG1P02750 347 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ITGB3P05106 788 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 HAPLN1P10915 354 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 EPB41P11171 864 aaKnown RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 SRFP11831 508 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 HARSP12081 509 aaKnown RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TNNI1P19237 187 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 CDC25CP30307 473 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 PRCPP42785 496 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ALDH1A3P47895 512 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TUBP50607 506 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 CLCN5P51795 746 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 VAMP7P51809 220 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 EPHB3P54753 998 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ZXDAP98168 799 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TFAMQ00059 246 aaKnown RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 PFKPQ01813 784 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 GCNT1Q02742 428 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 PRKCQQ04759 706 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 FCHO2Q0JRZ9 810 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TDGQ13569 410 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 HTR4Q13639 388 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ZNF268Q14587 947 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 PABPC1LQ4VXU2 614 aaKnown RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 SEZ6Q53EL9 994 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TMEM31Q5JXX7 168 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 CYP4A22Q5TCH4 519 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 WSCD1Q658N2 575 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 KRT39Q6A163 491 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 PRSS55Q6UWB4 352 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TMC5Q6UXY8 1006 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 HDXQ7Z353 690 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 CEP57Q86XR8 500 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TMC8Q8IU68 726 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 KCT2Q8NC54 265 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 OR5B17Q8NGF7 314 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 SLC7A14Q8TBB6 771 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 DEPDC1BQ8WUY9 529 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 KBTBD7Q8WVZ9 684 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 AUTS2Q8WXX7 1259 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms