RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 C11orf63Q6NUN7 778 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 GRASPQ7Z6J2 395 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 MICALL1Q8N3F8 863 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 EMC1Q8N766 993 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 DQX1Q8TE96 717 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 MRPS31Q92665 395 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 NPY6RQ99463 290 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 CNPY3Q9BT09 278 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 UBE2ZQ9H832 354 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 SALL4Q9UJQ4 1053 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 ANAPC7Q9UJX3 599 aa13.11□□□□□ -0.31
TRAPPC12-218ENST00000479897 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 MYO1FO00160 1098 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 CAPN9O14815 690 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 ENDOD1O94919 500 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 PDGFRAP16234 1089 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 DESP17661 470 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 WEE1P30291 646 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 DEKP35659 375 aaKnown RBP13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 MTHFRP42898 656 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 OGDHQ02218 1023 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 PIGHQ14442 188 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 CCDC14Q49A88 953 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 ARHGAP15Q53QZ3 475 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 HECTD3Q5T447 861 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 SYPL2Q5VXT5 272 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 STRADAQ7RTN6 431 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 PHLDB2Q86SQ0 1253 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 RNF139Q8WU17 664 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 RXFP2Q8WXD0 754 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 SUSD6Q92537 303 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 EDEM1Q92611 657 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 NECTIN4Q96NY8 510 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 SERPINB11Q96P15 392 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 NCAPGQ9BPX3 1015 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 TRIM7Q9C029 511 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 CCSER2Q9H7U1 834 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 TRIM10Q9UDY6 481 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 IP6K2Q9UHH9 426 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 CD207Q9UJ71 328 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 DUSP10Q9Y6W6 482 aa13.1□□□□□ -0.31
TRAPPC12-218ENST00000479897 NRG2O14511 850 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 IRAK2O43187 625 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 COCHO43405 550 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 PROSCO94903 275 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 ABL1P00519 1130 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 SULT1E1P49888 294 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 RNASE9P60153 205 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 NTHL1P78549 312 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 SLC7A9P82251 487 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 CYP4F8P98187 520 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 ATAT1Q5SQI0 421 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 UBE2Q2Q8WVN8 375 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 TCEAL4Q96EI5 215 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 CFAP57Q96MR6 1250 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 ADAM33Q9BZ11 813 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 TASP1Q9H6P5 420 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 MRPS23Q9Y3D9 190 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-218ENST00000479897 TRAV19A0A0A6YYK7 116 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 C2orf78A6NCI8 922 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 BUB1BO60566 1050 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 F9P00740 461 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 IGLV3-27P01718 113 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 TCF3P15923 654 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 CEBPBP17676 345 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 FSHRP23945 695 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 PSMA2P25787 234 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 PCK1P35558 622 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 ATP5C1P36542 298 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 SLC1A1P43005 524 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 KPNA1P52294 538 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 RING1Q06587 406 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 SMAD4Q13485 552 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 TEAD2Q15562 447 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 TRIP4Q15650 581 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 TXNDC8Q6A555 127 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 SLFN11Q7Z7L1 901 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 TAC4Q86UU9 113 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
TRAPPC12-218ENST00000479897 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms