RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 VPS16Q9H269 839 aa4.12□□□□□ -1.75
NF1-209ENST00000479536 ELAC1Q9H777 363 aaKnown RBP4.12□□□□□ -1.75
NF1-209ENST00000479536 RASSF1Q9NS23 344 aa4.12□□□□□ -1.75
NF1-209ENST00000479536 RNF181Q9P0P0 153 aa4.12□□□□□ -1.75
NF1-209ENST00000479536 EIF2B4Q9UI10 523 aaKnown RBP4.12□□□□□ -1.75
NF1-209ENST00000479536 SSX2IPQ9Y2D8 614 aa4.12□□□□□ -1.75
NF1-209ENST00000479536 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.12□□□□□ -1.75
NF1-209ENST00000479536 MYADML2A6NDP7 307 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 E7EVH7 732 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 TAF5LO75529 589 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 KRT38O76015 456 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 ZFPL1O95159 310 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 ELANEP08246 267 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 RBL1P28749 1068 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 ADORA2AP29274 412 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 EPHA3P29320 983 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 PDE6CP51160 858 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 CCR5P51681 352 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 EIF5P55010 431 aaKnown RBP4.11□□□□□ -1.75
NF1-209ENST00000479536 RPS7P62081 194 aaKnown RBP4.11□□□□□ -1.75
NF1-209ENST00000479536 VAMP2P63027 116 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 FPGSQ05932 587 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 MAPK7Q13164 816 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 TUBB3Q13509 450 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 HLXQ14774 488 aaPredicted RBP4.11□□□□□ -1.75
NF1-209ENST00000479536 RBM20Q5T481 1227 aaKnown RBP4.11□□□□□ -1.75
NF1-209ENST00000479536 VPS53Q5VIR6 699 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 ICE2Q659A1 982 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 CLEC9AQ6UXN8 241 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 LRRC55Q6ZSA7 311 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 MICALCLQ6ZW33 695 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 FAM109AQ8N4B1 249 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 ZNF276Q8N554 614 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 TMEM57Q8N5G2 664 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 CEP70Q8NHQ1 597 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 SUN3Q8TAQ9 357 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 PROKR1Q8TCW9 393 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 SNX19Q92543 992 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 GOLGA1Q92805 767 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 TWNKQ96RR1 684 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 WDR24Q96S15 920 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 MLST8Q9BVC4 326 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 TEX101Q9BY14 249 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 G6PC2Q9NQR9 355 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 TMEM160Q9NX00 188 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 KCNE5Q9UJ90 142 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 SERTAD3Q9UJW9 196 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 CNTN6Q9UQ52 1028 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 CHST2Q9Y4C5 530 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 SNX14Q9Y5W7 946 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 ITIH6Q6UXX5 1313 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 FER1L4A9Z1Z3 1794 aa4.11□□□□□ -1.75
NF1-209ENST00000479536 SETD1BQ9UPS6 1966 aaKnown RBP4.11□□□□□ -1.75
NF1-209ENST00000479536 PRSS47A8MTI9 375 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 EFCAB8A8MWE9 144 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 B4E171 279 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 INO80B-WBP1J3KQ70 363 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 TRIAP1O43715 76 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 RPP40O75818 363 aaKnown RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 CFIP05156 583 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 IFIT1P09914 478 aaKnown RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 ATP1A3P13637 1013 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 CAPN3P20807 821 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 YY1P25490 414 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 SERPINA4P29622 427 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 HTR7P34969 479 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 ZEB1P37275 1124 aaPredicted RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 TSPAN7P41732 249 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 NR1H2P55055 460 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 CXADRP78310 365 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 TIAL1Q01085 375 aaKnown RBP eCLIP4.1□□□□□ -1.75
NF1-209ENST00000479536 CHRNDQ07001 517 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 CSHL1Q14406 222 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 PTPAQ15257 358 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 RPS6KA2Q15349 733 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 SMAD1Q15797 465 aaKnown RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 LY6G5CQ5SRR4 150 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 DEPDC1Q5TB30 811 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 MAP3K21Q5TCX8 1036 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 PAPD7Q5XG87 772 aaKnown RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 B3GNTL1Q67FW5 361 aaPredicted RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 GDF7Q7Z4P5 450 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 ANKS1BQ7Z6G8 1248 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 TBC1D1Q86TI0 1168 aaPredicted RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 ABRAQ8N0Z2 381 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 TMEM132CQ8N3T6 1108 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 FSTL5Q8N475 847 aaPredicted RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 OSCP1Q8WVF1 389 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 ATRIPQ8WXE1 791 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 CPT1BQ92523 772 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 HDAC2Q92769 488 aaKnown RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 TMEM125Q96AQ2 219 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 LENG9Q96B70 501 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 OSBPL9Q96SU4 736 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 INO80BQ9C086 356 aaPredicted RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 CHODLQ9H9P2 273 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 UNKLQ9H9P5 680 aaKnown RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 JMJD4Q9H9V9 463 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 TRPM5Q9NZQ8 1165 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms