RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PDGFRBP09619 1106 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 FAM163BP0C2L3 166 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 GABRG2P18507 467 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 HDCP19113 662 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 WARSP23381 471 aaKnown RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 ATICP31939 592 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 GNL1P36915 607 aaPredicted RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 GRIK1P39086 918 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 MAGEA11P43364 429 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 MRPS21P82921 87 aaKnown RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 DNM1Q05193 864 aaKnown RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 KDSRQ06136 332 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 CYP24A1Q07973 514 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 NR1H3Q13133 447 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 KCNB1Q14721 858 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 PSMD6Q15008 389 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 DHCR24Q15392 516 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 KNOP1Q1ED39 458 aaKnown RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 CFAP221Q4G0U5 840 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 VSTM1Q6UX27 236 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 CCNI2Q6ZMN8 369 aaPredicted RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 EPM2AIP1Q7L775 607 aaPredicted RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 LIMS2Q7Z4I7 341 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 SLCO6A1Q86UG4 719 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 OR6B3Q8NGW1 331 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 MDM1Q8TC05 714 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 WHAMMQ8TF30 809 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 WBP2Q969T9 261 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 CEP295NLQ96MC4 621 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 MED10Q9BTT4 135 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 GTPBP2Q9BX10 602 aaKnown RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 FGFBP2Q9BYJ0 223 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 SCAND2PQ9GZW5 306 aaPredicted RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 CRTAC1Q9NQ79 661 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 DNAAF2Q9NVR5 837 aaKnown RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 FEZ2Q9UHY8 353 aaPredicted RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 SIX4Q9UIU6 781 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 SLC6A14Q9UN76 642 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 FRMD4BQ9Y2L6 1034 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 RAXQ9Y2V3 346 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 PCDHGA10Q9Y5H3 936 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 MYO18AQ92614 2054 aaKnown RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 PTPRJQ12913 1337 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 IGHV1OR15-9A0A0B4J2B8 117 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 A0A1B0GVL5 298 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 A0A1W2PQF6 199 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 TCRBV21S2A2A0A5A6 115 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ZNF840PA6NDX5 716 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CYSRT1A8MQ03 144 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 A8MXQ7 604 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 H0Y626 953 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ARHGAP33O14559 1287 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CBFA2T3O75081 653 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 TRIM16O95361 564 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ABL1P00519 1130 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 FTH1P19P0C7X4 201 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 KRT13P13646 458 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 PFKFB1P16118 471 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CMA1P23946 247 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 LMO2P25791 158 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 HOXD12P35452 270 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 SYKP43405 635 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 PPP3CCP48454 512 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CACNA2D1P54289 1103 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 PSMC1P62191 440 aaKnown RBP7.04□□□□□ -1.28
VCP-205ENST00000479300 SLC7A9P82251 487 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CUL4BQ13620 913 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 DUOXA1Q1HG43 343 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ZNF423Q2M1K9 1284 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 SOWAHAQ2M3V2 549 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ZNF699Q32M78 642 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 WDR72Q3MJ13 1102 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ZNF667Q5HYK9 610 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 SPDYCQ5MJ68 293 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
VCP-205ENST00000479300 CEP135Q66GS9 1140 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 FAM171BQ6P995 826 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ETFBKMTQ8IXQ9 262 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 C12orf56Q8IXR9 622 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CCDC150Q8NCX0 1101 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 GLIS3Q8NEA6 775 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CCDC26Q8TAB7 109 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ADAM32Q8TC27 787 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 SCFD1Q8WVM8 642 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 HNRNPLLQ8WVV9 542 aaKnown RBP7.04□□□□□ -1.28
VCP-205ENST00000479300 KBTBD7Q8WVZ9 684 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ADAMTS14Q8WXS8 1223 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ERLEC1Q96DZ1 483 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 P2RY11Q96G91 374 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 PAGE5Q96GU1 130 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 TNIP3Q96KP6 325 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ZFRQ96KR1 1074 aaKnown RBP7.04□□□□□ -1.28
VCP-205ENST00000479300 PNKPQ96T60 521 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 ACOX2Q99424 681 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 TTLL2Q9BWV7 592 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 IMPG2Q9BZV3 1241 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 SMPD4Q9NXE4 827 aa7.04□□□□□ -1.28
VCP-205ENST00000479300 CACNA2D2Q9NY47 1150 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms