RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 OAS1P00973 400 aaKnown RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 RHOP08100 348 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 RARGP13631 454 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 COMTP21964 271 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 PSMA2P25787 234 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 IL1R2P27930 398 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 GABRR2P28476 465 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 MAN1A1P33908 653 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 SULT1E1P49888 294 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 ATP11AP98196 1134 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 SLC25A11Q02978 314 aaKnown RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 DCAF6Q58WW2 860 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 ZNF569Q5MCW4 686 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 RARS2Q5T160 578 aaKnown RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 ARTNQ5T4W7 220 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 GRASPQ7Z6J2 395 aaPredicted RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 ITIH5Q86UX2 942 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 FAM172AQ8WUF8 416 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 KRT35Q92764 455 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 WBP2Q969T9 261 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 ZFRQ96KR1 1074 aaKnown RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 CNPY3Q9BT09 278 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 SMOC2Q9H3U7 446 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 SFXN1Q9H9B4 322 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 ABCC13Q9NSE7 274 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 PIGVQ9NUD9 493 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 DZANK1Q9NVP4 752 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 CLIC5Q9NZA1 410 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 IP6K2Q9UHH9 426 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 PACSIN2Q9UNF0 486 aaPredicted RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 ALG6Q9Y672 507 aa13.69□□□□□ -0.22
CHD3-210ENST00000479080 PRRC2BQ5JSZ5 2229 aaKnown RBP13.69□□□□□ -0.22
CHD3-210ENST00000479080 SPTBN5Q9NRC6 3674 aaKnown RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 A0A1W2PRU2 124 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 MYO1FO00160 1098 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 DDX3YO15523 660 aaKnown RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 IRAK2O43187 625 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 MSI1O43347 362 aaKnown RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 COCHO43405 550 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 ZNF500O60304 480 aaPredicted RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 MYL4P12829 197 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 NCAM1P13591 858 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 SDC4P31431 198 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 ZXDBP98169 803 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 CDO1Q16878 200 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 SLC25A52Q3SY17 297 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 BTBD8Q5XKL5 378 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 PDZD8Q8NEN9 1154 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 PGAP3Q96FM1 320 aaPredicted RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 MSLNLQ96KJ4 702 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 C16orf45Q96MC5 204 aaPredicted RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 TLR10Q9BXR5 811 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 MAGEB5Q9BZ81 275 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 RNF38Q9H0F5 515 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 S1PR5Q9H228 398 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 TLR8Q9NR97 1041 aaKnown RBP13.68□□□□□ -0.22
CHD3-210ENST00000479080 TMPRSS4Q9NRS4 437 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 SFMBT1Q9UHJ3 866 aa13.68□□□□□ -0.22
CHD3-210ENST00000479080 ANAPC1Q9H1A4 1944 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 TLR5O60602 858 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 TRUB2O95900 331 aaKnown RBP13.67□□□□□ -0.22
CHD3-210ENST00000479080 ATP1A1P05023 1023 aaKnown RBP13.67□□□□□ -0.22
CHD3-210ENST00000479080 CEBPBP17676 345 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 PTPN2P17706 415 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 IGFBP4P22692 258 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 MIPP30301 263 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
CHD3-210ENST00000479080 MEI1Q5TIA1 1274 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 TXNDC8Q6A555 127 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 CC2D1AQ6P1N0 951 aaPredicted RBP13.67□□□□□ -0.22
CHD3-210ENST00000479080 STRADAQ7RTN6 431 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 GPR149Q86SP6 731 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 DAAM2Q86T65 1068 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 ARHGAP18Q8N392 663 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 CCDC185Q8N715 623 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 RIN3Q8TB24 985 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 ITFG1Q8TB96 612 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 ADAMTS19Q8TE59 1207 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 SMG7Q92540 1137 aaKnown RBP13.67□□□□□ -0.22
CHD3-210ENST00000479080 SLC39A13Q96H72 371 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 TRPM5Q9NZQ8 1165 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
CHD3-210ENST00000479080 USTQ9Y2C2 406 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 DOCK6Q96HP0 2047 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 C2orf16Q68DN1 1984 aa13.67□□□□□ -0.22
CHD3-210ENST00000479080 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 M0QYT0 321 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 ENC1O14682 589 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 IGLV3-27P01718 113 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 PSEN1P49768 467 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 PEX5P50542 639 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 TUBP50607 506 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 GNG11P61952 73 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms