RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 MDM4O15151 490 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 ZNF217O75362 1048 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 MYL1P05976 194 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 RARGP13631 454 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 KRT13P13646 458 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 CD58P19256 250 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 NDUFV2P19404 249 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 NR2F2P24468 414 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 DGKGP49619 791 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 ZNF33AQ06730 810 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 PKP1Q13835 747 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 C10orf120Q5SQS8 335 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 KIAA1211LQ6NV74 962 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 RABEPKQ7Z6M1 372 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 TADA2BQ86TJ2 420 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 MIB1Q86YT6 1006 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 CEP76Q8TAP6 659 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 IPO4Q8TEX9 1081 aaKnown RBP13.96□□□□□ -0.17
VCL-205ENST00000478896 TMEM174Q8WUU8 243 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 TWNKQ96RR1 684 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 ACOX2Q99424 681 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.17
VCL-205ENST00000478896 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 FSCN3Q9NQT6 498 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 OSER1Q9NX31 292 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 USP25Q9UHP3 1055 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 DNMT3LQ9UJW3 386 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 NAGPAQ9UK23 515 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 STARD13Q9Y3M8 1113 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 RAD54BQ9Y620 910 aa13.96□□□□□ -0.17
VCL-205ENST00000478896 ASCC3Q8N3C0 2202 aaKnown RBP13.95□□□□□ -0.18
VCL-205ENST00000478896 IGHV1OR15-9A0A0B4J2B8 117 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 A0A1W2PQF6 199 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 NDUFS2O75306 463 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 RALAP11233 206 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 PLA2G4AP47712 749 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 GCLMP48507 274 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 GFPT1Q06210 699 aaPredicted RBP13.95□□□□□ -0.18
VCL-205ENST00000478896 INCA1Q0VD86 236 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 PEAR1Q5VY43 1037 aaPredicted RBP13.95□□□□□ -0.18
VCL-205ENST00000478896 KIAA1324Q6UXG2 1013 aaKnown RBP13.95□□□□□ -0.18
VCL-205ENST00000478896 TOGARAM2Q6ZUX3 1019 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 INTS8Q75QN2 995 aaKnown RBP13.95□□□□□ -0.18
VCL-205ENST00000478896 RGL4Q8IZJ4 473 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 HSPA12BQ96MM6 686 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 SCNM1Q9BWG6 230 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 NIF3L1Q9GZT8 377 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 CYP3A43Q9HB55 503 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 NMUR1Q9HB89 426 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■□□□□ 8.6
VCL-205ENST00000478896 CACNA2D2Q9NY47 1150 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 MARK1Q9P0L2 795 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 RASAL2Q9UJF2 1139 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 SLC6A14Q9UN76 642 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 TRAF3IP3Q9Y228 551 aa13.95□□□□□ -0.18
VCL-205ENST00000478896 PRRT4C9JH25 899 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 HHLA1C9JL84 531 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 MAPK13O15264 365 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 GREM1O60565 184 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 OPHN1O60890 802 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
VCL-205ENST00000478896 SERPINF2P08697 491 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 SYKP43405 635 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 PSEN1P49768 467 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 ZNF394Q53GI3 561 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 KLHDC10Q6PID8 442 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 FAM186BQ8IYM0 893 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 TRIML1Q8N9V2 468 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 TAS1R2Q8TE23 839 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 SPATA32Q96LK8 384 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 GABRG3Q99928 467 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 APOBEC3GQ9HC16 384 aaKnown RBP13.94□□□□□ -0.18
VCL-205ENST00000478896 RCOR1Q9UKL0 485 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 HCN2Q9UL51 889 aa13.94□□□□□ -0.18
VCL-205ENST00000478896 KMT2BQ9UMN6 2715 aaPredicted RBP13.93□□□□□ -0.18
VCL-205ENST00000478896 EPG5Q9HCE0 2579 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 PCDH15Q96QU1 1955 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 CILPO75339 1184 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 STC2O76061 302 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 SYPP08247 313 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 HMBSP08397 361 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 CMA1P23946 247 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
VCL-205ENST00000478896 KIF11P52732 1056 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 SIM1P81133 766 aaPredicted RBP13.93□□□□□ -0.18
VCL-205ENST00000478896 STARD3Q14849 445 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 C1orf220Q5T0J3 134 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
VCL-205ENST00000478896 CCDC186Q7Z3E2 898 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 MINDY1Q8N5J2 469 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 CDK5RAP1Q96SZ6 601 aaKnown RBP13.93□□□□□ -0.18
VCL-205ENST00000478896 SLC6A17Q9H1V8 727 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 CD93Q9NPY3 652 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 MAPK8IP1Q9UQF2 711 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms