RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 DMAP1Q9NPF5 467 aaPredicted RBP18.16■□□□□ 0.5
VIM-204ENST00000478746 TOR4AQ9NXH8 423 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 MARK1Q9P0L2 795 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 USP36Q9P275 1121 aaKnown RBP18.16■□□□□ 0.5
VIM-204ENST00000478746 LSM7Q9UK45 103 aaKnown RBP18.16■□□□□ 0.5
VIM-204ENST00000478746 SMC3Q9UQE7 1217 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 FNDC3AQ9Y2H6 1198 aaKnown RBP18.16■□□□□ 0.5
VIM-204ENST00000478746 STON1Q9Y6Q2 735 aa18.16■□□□□ 0.5
VIM-204ENST00000478746 KNL1Q8NG31 2342 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 FAM92AA1XBS5 289 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 METTL12A8MUP2 240 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 FLRT2O43155 660 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 OXTRP30559 389 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 PGFP49763 221 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 GOLGA8FQ08AF8 430 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 GOLGA8DPQ0D2H9 430 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 SUZ12Q15022 739 aaKnown RBP18.15■□□□□ 0.5
VIM-204ENST00000478746 FUT11Q495W5 492 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 CCDC73Q6ZRK6 1079 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 FAM35AQ86V20 835 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 SCUBE3Q8IX30 993 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 CCDC65Q8IXS2 484 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 BAHD1Q8TBE0 780 aaPredicted RBP18.15■□□□□ 0.5
VIM-204ENST00000478746 CCDC127Q96BQ5 260 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 SMARCD1Q96GM5 515 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 CLIC6Q96NY7 704 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 TRIM9Q9C026 710 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 TLR8Q9NR97 1041 aaKnown RBP18.15■□□□□ 0.5
VIM-204ENST00000478746 PCDHGB2Q9Y5G2 931 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
VIM-204ENST00000478746 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
VIM-204ENST00000478746 KCNJ18B7U540 433 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 AP1G2O75843 785 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 DKK1O94907 266 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 STAU1O95793 577 aaKnown RBP18.14■□□□□ 0.49
VIM-204ENST00000478746 ATICP31939 592 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 ATP5C1P36542 298 aaKnown RBP18.14■□□□□ 0.49
VIM-204ENST00000478746 TPMTP51580 245 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 ZNF132P52740 706 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 CDH8P55286 799 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 MYL6P60660 151 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 BNC1Q01954 994 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 C19orf57Q0VDD7 668 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 SNRNP35Q16560 246 aaKnown RBP18.14■□□□□ 0.49
VIM-204ENST00000478746 ADAM32Q8TC27 787 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 BHMTQ93088 406 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 SYAP1Q96A49 352 aaPredicted RBP18.14■□□□□ 0.49
VIM-204ENST00000478746 TNIP3Q96KP6 325 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 CGRRF1Q99675 332 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 NUP58Q9BVL2 599 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 MKRN2Q9H000 416 aaKnown RBP18.14■□□□□ 0.49
VIM-204ENST00000478746 FBXO44Q9H4M3 255 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 PLK2Q9NYY3 685 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 EIF2B4Q9UI10 523 aaKnown RBP18.14■□□□□ 0.49
VIM-204ENST00000478746 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.49
VIM-204ENST00000478746 CABIN1Q9Y6J0 2220 aa18.14■□□□□ 0.49
VIM-204ENST00000478746 A0A087WV48 116 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 STAT6P42226 847 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 PSMD6Q15008 389 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 TMPRSS6Q8IU80 811 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 PDCD7Q8N8D1 485 aaKnown RBP18.13■□□□□ 0.49
VIM-204ENST00000478746 ZNF516Q92618 1163 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 SIPA1Q96FS4 1042 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 CRELD1Q96HD1 420 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 FBXO10Q9UK96 956 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 SHROOM3Q8TF72 1996 aa18.13■□□□□ 0.49
VIM-204ENST00000478746 A0A1B0GVT2 93 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 NPC1O15118 1278 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 SYNCRIPO60506 623 aaKnown RBP18.12■□□□□ 0.49
VIM-204ENST00000478746 PHACTR2O75167 634 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 ACADMP11310 421 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 HOXD13P35453 343 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 CYP24A1Q07973 514 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 CAMK2BQ13554 666 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 RABEP1Q15276 862 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 PRCCQ92733 491 aaPredicted RBP18.12■□□□□ 0.49
VIM-204ENST00000478746 HPS3Q969F9 1004 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 UBL7Q96S82 380 aaPredicted RBP18.12■□□□□ 0.49
VIM-204ENST00000478746 SMOQ99835 787 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 XYLT2Q9H1B5 865 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 SMYD3Q9H7B4 428 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 KRT82Q9NSB4 513 aa18.12■□□□□ 0.49
VIM-204ENST00000478746 THAP10Q9P2Z0 257 aaPredicted RBP18.12■□□□□ 0.49
VIM-204ENST00000478746 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.12■□□□□ 0.49
VIM-204ENST00000478746 KNTC1P50748 2209 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 FAM149AA5PLN7 773 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 TNFSF14O43557 240 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 BEST1O76090 585 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 ACO1P21399 889 aaKnown RBP18.11■□□□□ 0.49
VIM-204ENST00000478746 IL12RB1P42701 662 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 PLA2G4AP47712 749 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 CSNK1EP49674 416 aaKnown RBP18.11■□□□□ 0.49
VIM-204ENST00000478746 ACOT1Q86TX2 421 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 ZMIZ2Q8NF64 920 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 C1orf216Q8TAB5 229 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 UCMAQ8WVF2 138 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 CYLDQ9NQC7 956 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 BTBD3Q9Y2F9 522 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 SLC27A6Q9Y2P4 619 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms