RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
AGRN-207ENST00000478677 PGBD3Q8N328 593 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 HDDC3Q8N4P3 179 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 ZCCHC9Q8N567 271 aaKnown RBP12.79□□□□□ -0.36
AGRN-207ENST00000478677 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 TOE1Q96GM8 510 aaKnown RBP12.79□□□□□ -0.36
AGRN-207ENST00000478677 ANKRD36BP1Q96IX9 119 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 SLITRK1Q96PX8 696 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 CCDC86Q9H6F5 360 aaKnown RBP12.79□□□□□ -0.36
AGRN-207ENST00000478677 PANK4Q9NVE7 773 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 NUDT5Q9UKK9 219 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 EXOC7Q9UPT5 735 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 PCDHB13Q9Y5F0 798 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
AGRN-207ENST00000478677 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
AGRN-207ENST00000478677 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
AGRN-207ENST00000478677 CABIN1Q9Y6J0 2220 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 CYP26A1O43174 497 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 C4BPAP04003 597 aaKnown RBP12.78□□□□□ -0.36
AGRN-207ENST00000478677 ZNF883P0CG24 379 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 PRKCHP24723 683 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 ANXA13P27216 316 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 TPMTP51580 245 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 HNRNPDQ14103 355 aaKnown RBP12.78□□□□□ -0.36
AGRN-207ENST00000478677 SHBQ15464 509 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 LAYNQ6UX15 382 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 BRAPQ7Z569 592 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 C12orf29Q8N999 325 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 USP28Q96RU2 1077 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 MMS19Q96T76 1030 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 PLK2Q9NYY3 685 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
AGRN-207ENST00000478677 SLC27A6Q9Y2P4 619 aa12.78□□□□□ -0.36
AGRN-207ENST00000478677 SPENQ96T58 3664 aaKnown RBP12.77□□□□□ -0.36
AGRN-207ENST00000478677 FAM149AA5PLN7 773 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 METTL12A8MUP2 240 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 ZNF217O75362 1048 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 STC2O76061 302 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
AGRN-207ENST00000478677 BMP15O95972 392 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 IDEP14735 1019 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 CD6P30203 668 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 ASPAP45381 313 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 DLG4P78352 724 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 CUL4AQ13619 759 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 ALCAMQ13740 583 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 BYSLQ13895 437 aaKnown RBP12.77□□□□□ -0.37
AGRN-207ENST00000478677 SMAD1Q15797 465 aaKnown RBP12.77□□□□□ -0.37
AGRN-207ENST00000478677 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 HLA-BQ31612 363 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 ANO4Q32M45 955 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 TPGS1Q6ZTW0 290 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 SV2BQ7L1I2 683 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 C12orf56Q8IXR9 622 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 FAM217AQ8IXS0 508 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 CHPFQ8IZ52 775 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 CRYBG2Q8N1P7 616 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 PDZD8Q8NEN9 1154 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 COL26A1Q96A83 441 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 LRIG1Q96JA1 1093 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
AGRN-207ENST00000478677 MYO18BQ8IUG5 2567 aa12.77□□□□□ -0.37
AGRN-207ENST00000478677 COL27A1Q8IZC6 1860 aaPredicted RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 A0A1B0GTW7 788 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 A8MXQ7 604 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 CLIC2O15247 247 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 EIF3DO15371 548 aaKnown RBP eCLIP12.76□□□□□ -0.37
AGRN-207ENST00000478677 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 TNNC2P02585 160 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 SYPP08247 313 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 DLATP10515 647 aaKnown RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 NCAM1P13591 858 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 CYP4F3Q08477 520 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 RABEP1Q15276 862 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 KIF19Q2TAC6 998 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 DCAF12L1Q5VU92 463 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 TRMT11Q7Z4G4 463 aaKnown RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 ACOT1Q86TX2 421 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 SLC2A14Q8TDB8 520 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 CCDC127Q96BQ5 260 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 BBS2Q9BXC9 721 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 C6orf106Q9H6K1 298 aaPredicted RBP12.76□□□□□ -0.37
AGRN-207ENST00000478677 GAREM1Q9H706 876 aa12.76□□□□□ -0.37
AGRN-207ENST00000478677 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms